PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc020177.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 342aa MW: 39766.1 Da PI: 8.6349

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc020177.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	48.8	2.3e-15	61	163	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...............tekerrtraetrtgCkaklkvkkek. 72 ++Y+ YA + F vrks skk ng++t++ Cs+ gk+++ ++ ++k++r++++t t+Cka++ +k Cse_sc020177.1_g010.1 61 NMYKVYAAKGRFGVRKSGSKKW--NGQVTHKYVICSRGGKPRKMAETntlmedvqendnvdeKTKRKRRSSTTLTDCKARICLKVIPg 146 58*************99988..999***********999999********97777777888899*********9 PP FAR1 73 dgkwevtkleleHnHel 89 +k+e+++ ++HnH+l Cse_sc020177.1_g010.1 147 ISKYELYDWTENHNHPL 163 9************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MDNAHYDQDD NNEDDVDVDV YDLDPEFIPT PNGSSYWVPN VPVDEKPKKG TRFDMFQEAV 60 NMYKVYAAKG RFGVRKSGSK KWNGQVTHKY VICSRGGKPR KMAETNTLME DVQENDNVDE 120 KTKRKRRSST TLTDCKARIC LKVIPGISKY ELYDWTENHN HPLIVQSNMD LSRARRKLQY 180 GDYMFIHRAS LSNIGAQKEH RLRVALLGGF DKVRGMPVFP DSHHRLCMWH ITQKLPGKVL 240 GDLDDDSEVR KEFHKLVWNV YIGPELFEQR WHDLISKYNL SENKWLTDMY AIRERWVPGY 300 FSHLPMCGLM KTTSQSESSN AFFQVYSSLG NSLVHFVNTN KP

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MDNAHYDQDD NNEDDVDVDV YDLDPEFIPT PNGSSYWVPN VPVDEKPKKG TRFDMFQEAV  60
NMYKVYAAKG RFGVRKSGSK KWNGQVTHKY VICSRGGKPR KMAETNTLME DVQENDNVDE  120
KTKRKRRSST TLTDCKARIC LKVIPGISKY ELYDWTENHN HPLIVQSNMD LSRARRKLQY  180
GDYMFIHRAS LSNIGAQKEH RLRVALLGGF DKVRGMPVFP DSHHRLCMWH ITQKLPGKVL  240
GDLDDDSEVR KEFHKLVWNV YIGPELFEQR WHDLISKYNL SENKWLTDMY AIRERWVPGY  300
FSHLPMCGLM KTTSQSESSN AFFQVYSSLG NSLVHFVNTN KP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-15	FAR1 family protein