PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc020079.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NF-YA
Protein Properties Length: 276aa    MW: 30672.3 Da    PI: 8.3324
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc020079.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA98.38.3e-31156212158
              CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                            d p+YVNaKQy++Il+RRq Rakle+++kl  k+rkpylheSRhkhAl   RgsgGrF
  Cse_sc020079.1_g040.1 156 DGPIYVNAKQYNGILRRRQIRAKLEAQNKL-VKNRKPYLHESRHKHALSTVRGSGGRF 212
                            57****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MQMVVAHGGC SAECVVFGDD VTDGGVDDLE KIANVVYCFF KYNQDSSTGH SSDQSNKDDN  60
ILHSLSILKI NESYKRLEEA QIKPILFMGN PSFGMTDQQL EKNMPIVQNA YADHYLNGLS  120
AGYAPHPMVT IFVIILIFNX HIAPARVPLP LDLSEDGPIY VNAKQYNGIL RRRQIRAKLE  180
AQNKLVKNRK PYLHESRHKH ALSTVRGSGG RFLPSNKQQQ SKPASRFLSS HCSSASYPSG  240
SDHVMFSQTD HGFSSISWGN EGFLSNGDHN RNSIGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17590.24e-36NF-YA family protein