PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc020068.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB_related

Protein Properties

Length: 254aa MW: 29531.9 Da PI: 8.9916

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc020068.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.6	1.6e-14	33	78	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 r+ +T Ed++++ + +lG++ W+ I+++++ gRt++++k+rw++yl Cse_sc020068.1_g020.1 33 RDTFTFHEDDIILTLYGMLGNK-WSQISQHLP-GRTDNEIKNRWHSYL 78 7899****************.*****.**********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MVLAAGVRSP FMQRSGKSCR LRWINYLRRG LKRDTFTFHE DDIILTLYGM LGNKWSQISQ 60 HLPGRTDNEI KNRWHSYLKK KVDKQTDSSL ESSEAYGCRK LPKILFADWL CEKGKGDDAF 120 RLFDEIKTVN DFVNSWDVCN SILDSFLKES KAAKAELFFE KWRLDEGKYG RPNETTYTIM 180 LNGYCNDNDV SKALVVFEEI LKRKMVNGAV YERIIRLLCD CRRVNEALKY LNESVENGHF 240 SLLTKMASAF PVSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48920.1	3e-31	MYB family protein