PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc020001.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 494aa MW: 56266.2 Da PI: 9.0375

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc020001.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	28.9	3.7e-09	28	75	2	48
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...t 48 Y++YA e+GF vr+ ++++ g +++++f Cskeg+++ + k+ Cse_sc020001.1_g010.1 28 AYKDYAAEAGFIVRIGHQTND--GGIVINKEFLCSKEGTKKVKVKEfdsL 75 5*************98877..99*************9998884332 PP

Sequence ? help Back to Top
Protein Sequence Length: 494 aa Download sequence
MLIKPVVVKT LVPVEGTLFD SVEEAYNAYK DYAAEAGFIV RIGHQTNDGG IVINKEFLCS 60 KEGTKKVKVK EFDSLKDNCD ANAIGSTICE EGGFKKRLCS LVWRESDEPV EFVQKWEALL 120 HKFDLDKHKW LNDIWIPAYF RDIPMSGLMK TTSRSESENY CFGHNSNWSY TLVHFLFRYE 180 SALDQQRNNQ RVLDNKSRIN RPSLKINHLV EQHAAEFYTL EAFYVVHAEI VASIDSCTGS 240 MKNLGYVKDS DKEWFGEFKV EYNEETRSVN YTCLHFERRS LLCRHAFYTL RAHGINKIPK 300 QYLLKRWKKE VIVLPLLGSS FKANGSSGSC ISKIYSKVNA IINHCGYDEE KMGIFLEKMS 360 IYESGLESST VAQSSGNKED NISSMIGIPK PAAIDVFPLD IGSNKGGVTG ARYKPSNNDV 420 KFKDPKECGK KLRNCKICKE LTNHDYRNCP NNPDRKVLTA KKAIKKTKRN GKKVKNKSNN 480 ANAEHGTEVF NFKE

Sequence ? help Back to Top

Protein Sequence Length: 494 aa Download sequence

MLIKPVVVKT LVPVEGTLFD SVEEAYNAYK DYAAEAGFIV RIGHQTNDGG IVINKEFLCS  60
KEGTKKVKVK EFDSLKDNCD ANAIGSTICE EGGFKKRLCS LVWRESDEPV EFVQKWEALL  120
HKFDLDKHKW LNDIWIPAYF RDIPMSGLMK TTSRSESENY CFGHNSNWSY TLVHFLFRYE  180
SALDQQRNNQ RVLDNKSRIN RPSLKINHLV EQHAAEFYTL EAFYVVHAEI VASIDSCTGS  240
MKNLGYVKDS DKEWFGEFKV EYNEETRSVN YTCLHFERRS LLCRHAFYTL RAHGINKIPK  300
QYLLKRWKKE VIVLPLLGSS FKANGSSGSC ISKIYSKVNA IINHCGYDEE KMGIFLEKMS  360
IYESGLESST VAQSSGNKED NISSMIGIPK PAAIDVFPLD IGSNKGGVTG ARYKPSNNDV  420
KFKDPKECGK KLRNCKICKE LTNHDYRNCP NNPDRKVLTA KKAIKKTKRN GKKVKNKSNN  480
ANAEHGTEVF NFKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-20	FAR1 family protein