PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc019853.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB | ||||||||
Protein Properties | Length: 374aa MW: 42992.5 Da PI: 7.8484 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 40.6 | 5.9e-13 | 7 | 49 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +W++eEde l++++++ G+++W+ I + ++ R++k+c sr ++ Cse_sc019853.1_g030.1 7 AWSPEEDEMLLNLIEKNGPRNWSPICKSIP-DRSGKSCWSRCFS 49 8*****************************.*******999765 PP | |||||||
2 | Myb_DNA-binding | 41.2 | 3.8e-13 | 53 | 95 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+ Ede l+++++++G++ W++I++ + gR++ +c srw+++ Cse_sc019853.1_g030.1 53 SFTPKEDEMLLNLFEKHGPN-WSLISNSIR-GRSGQSCTSRWLSL 95 69****************77.*********.***********976 PP | |||||||
3 | Myb_DNA-binding | 33.3 | 1.1e-10 | 107 | 147 | 4 | 46 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 W++eEde l + v+++G + W++I++ ++ g ++k+ +rw++ Cse_sc019853.1_g030.1 107 WSPEEDEMLENRVQEHGRN-WSLISKSIP-GSSGKSSMLRWLS 147 *****************66.*********.***********87 PP | |||||||
4 | Myb_DNA-binding | 42.3 | 1.7e-13 | 151 | 191 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++T+ Ede l ++v+++G++ W++I++ ++ gR++ +c srw+ Cse_sc019853.1_g030.1 151 PFTPGEDEMLQNLVEKHGPN-WSLISKSLP-GRSGQSCLSRWL 191 79****************77.*********.***********6 PP | |||||||
5 | Myb_DNA-binding | 43.4 | 7.7e-14 | 196 | 238 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T eEde +++a++++G + W++I r + gRt++ +k++w++ Cse_sc019853.1_g030.1 196 PFTHEEDETILRAHARFGDK-WSAIGRLLT-GRTDNVIKNHWNSI 238 89****************99.********9.***********975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 374 aa Download sequence |
MDQIEEAWSP EEDEMLLNLI EKNGPRNWSP ICKSIPDRSG KSCWSRCFSL QRSFTPKEDE 60 MLLNLFEKHG PNWSLISNSI RGRSGQSCTS RWLSLVEKEM DQIKRLWSPE EDEMLENRVQ 120 EHGRNWSLIS KSIPGSSGKS SMLRWLSLYR PFTPGEDEML QNLVEKHGPN WSLISKSLPG 180 RSGQSCLSRW LFVHRPFTHE EDETILRAHA RFGDKWSAIG RLLTGRTDNV IKNHWNSILK 240 WKSRSMTNED ITIRVCMCIP LFRYSSAPGR GQGSSYIHDG NLSHEVGGVS RQPPSRDEMG 300 RDNMSSGSTH SYSGDESAPS WNALNIRDSS PTMTESDRLL NFSREMIIES YIRVGDNLFL 360 LYVNRTHLRT IVIK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37260.1 | 5e-38 | MYB family protein |