PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc019782.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 580aa MW: 68013.3 Da PI: 9.8051

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc019782.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	31.6	5.4e-10	1	64	34	90
FAR1 34 vCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +C+keg +++ + + +ek++r+++ + tgC+a+++++++ +gk++++k+ +HnH l Cse_sc019782.1_g010.1 1 MCNKEGAPRHINVDsldpkhSEKQKRNTTLHVTGCQARIRLELDIvSGKYKLIKFIAKHNHMLI 64 59999999988777888988899999999*************99*************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 580 aa Download sequence
MCNKEGAPRH INVDSLDPKH SEKQKRNTTL HVTGCQARIR LELDIVSGKY KLIKFIAKHN 60 HMLIPKEYKH FTKKQRKMTE AEKMFVVKAA TNKIGATRAH NLLRSMKGGY EYVHGTSDDC 120 KNHQRDINMF IGESHTQMLI NKMENRKMYV PNFTFQYKVE ESELVAMFWA DEVAKCNYKE 180 FGDIVSIDAT FRSNKYNMVF VPFTGVDNHK QCVTLGSGML LKEDTESYTW LLKAFMTAFS 240 KEPTMVVTDQ DGAMKRAIEG VFTKSKHRLC MWHIHQKIPA KICKEIYNET DFKKRLNKIV 300 WNMFMEPLEF EEKWAKMIED FGLQNHKWMT KMFKLREMWI PAYFFNSPLF GLRRTASRSE 360 SENSFFKSFT SLGATLVSFM MSYESAMERQ RYRQEHLDFK TVDATPKCET KLAIERHATR 420 RQKFGSYRIL NKEVAKELAE EGETVATETF ADYKNRDINF IPKQYILRRW TRDIIPPELR 480 RKRNRYGETN EEIERFTNEA TFLVDECLFR LSKDKVKMGA FVEKLKTLKT EVEAEVPNPP 540 SRNTGDVIGE HFAISNPEKK IVNDPTKARN KGNISEAERN

Sequence ? help Back to Top

Protein Sequence Length: 580 aa Download sequence

MCNKEGAPRH INVDSLDPKH SEKQKRNTTL HVTGCQARIR LELDIVSGKY KLIKFIAKHN  60
HMLIPKEYKH FTKKQRKMTE AEKMFVVKAA TNKIGATRAH NLLRSMKGGY EYVHGTSDDC  120
KNHQRDINMF IGESHTQMLI NKMENRKMYV PNFTFQYKVE ESELVAMFWA DEVAKCNYKE  180
FGDIVSIDAT FRSNKYNMVF VPFTGVDNHK QCVTLGSGML LKEDTESYTW LLKAFMTAFS  240
KEPTMVVTDQ DGAMKRAIEG VFTKSKHRLC MWHIHQKIPA KICKEIYNET DFKKRLNKIV  300
WNMFMEPLEF EEKWAKMIED FGLQNHKWMT KMFKLREMWI PAYFFNSPLF GLRRTASRSE  360
SENSFFKSFT SLGATLVSFM MSYESAMERQ RYRQEHLDFK TVDATPKCET KLAIERHATR  420
RQKFGSYRIL NKEVAKELAE EGETVATETF ADYKNRDINF IPKQYILRRW TRDIIPPELR  480
RKRNRYGETN EEIERFTNEA TFLVDECLFR LSKDKVKMGA FVEKLKTLKT EVEAEVPNPP  540
SRNTGDVIGE HFAISNPEKK IVNDPTKARN KGNISEAERN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-63	FAR1 family protein