PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Cse_sc019726.1_g040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 249aa MW: 28132 Da PI: 9.8263 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 166.8 | 7.3e-52 | 14 | 138 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 lppGfrFhPtdeelvv+yLk+kv++ +l++ ++i+evd++k++Pw+Lp + e+e +fFs+++ ky++g+r+nrat+sgyWkatg Cse_sc019726.1_g040.1 14 LPPGFRFHPTDEELVVQYLKRKVHSFPLPA-SIIPEVDVCKSDPWELPGN---CEQERFFFSTKEVKYPNGNRSNRATESGYWKATGL 97 79****************************.89***************44...46899****************************** PP NAM 89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 dk+++++ +++lvg+kktLvfy+g+ p+g++tdW+mheyrl Cse_sc019726.1_g040.1 98 DKKIVTScNNQLVGMKKTLVFYRGKPPNGSRTDWIMHEYRL 138 *****9988899***************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 249 aa Download sequence |
MERLNFVKNG VLRLPPGFRF HPTDEELVVQ YLKRKVHSFP LPASIIPEVD VCKSDPWELP 60 GNCEQERFFF STKEVKYPNG NRSNRATESG YWKATGLDKK IVTSCNNQLV GMKKTLVFYR 120 GKPPNGSRTD WIMHEYRLAT PQPKNPPQGM ENWVICRIFL KKRGSNANRN DEETKPTIPT 180 ISDCKSLKSK PIFYDFMAAG ASKRRRTDLN LTPTSSASGS SGITDDASSC DEHEASSNKL 240 NDVSTLKKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G13180.1 | 1e-99 | NAC family protein |