PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc019648.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bZIP

Protein Properties

Length: 357aa MW: 40820.4 Da PI: 8.1618

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc019648.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	44.4	3.6e-14	37	95	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++ +r+ +NRe+ArrsR+RK++ ++ L+ v +L +eN + ++ ++ ++++ ++++e+ Cse_sc019648.1_g020.1 37 RKKKRMLSNRESARRSRKRKQQHLDDLTAQVSQLRKENNQIISSVSITTQHYVSVEAEN 95 5789***************************************9999888888877776 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MATSSGTTIS SDVSYPYPNP LQNSGSEEDL QNLMNERKKK RMLSNRESAR RSRKRKQQHL 60 DDLTAQVSQL RKENNQIISS VSITTQHYVS VEAENSVLRA QVTELSNRLQ SLNEMIAFMY 120 QPMDTNCGFV EEQYGNGTEF VDEMMVNSLS YLCANQPILA SADMIQRRPQ SAPVRRVEAL 180 VVDGVRRRGR PNIRWEDRLK LDLMELRLTE DMISDRNGWR DRIRICGFMP RVLLCFALCC 240 SLLLVCFWCA WAFGFMSIAL CYWLIYGVLV RGSFSCMPCL LVCLFACFLL LRFCLLFCRM 300 LSLSFRTSTH ALAGGLVGSS LSTHGFTLVD LDFTKDIFHV ILEFLLYNIG SVPNIRQ

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MATSSGTTIS SDVSYPYPNP LQNSGSEEDL QNLMNERKKK RMLSNRESAR RSRKRKQQHL  60
DDLTAQVSQL RKENNQIISS VSITTQHYVS VEAENSVLRA QVTELSNRLQ SLNEMIAFMY  120
QPMDTNCGFV EEQYGNGTEF VDEMMVNSLS YLCANQPILA SADMIQRRPQ SAPVRRVEAL  180
VVDGVRRRGR PNIRWEDRLK LDLMELRLTE DMISDRNGWR DRIRICGFMP RVLLCFALCC  240
SLLLVCFWCA WAFGFMSIAL CYWLIYGVLV RGSFSCMPCL LVCLFACFLL LRFCLLFCRM  300
LSLSFRTSTH ALAGGLVGSS LSTHGFTLVD LDFTKDIFHV ILEFLLYNIG SVPNIRQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	37	56	RKKKRMLSNRESARRSRKRK
2	38	57	RKKKRMLSNRESARRSRKRK
3	39	58	RKKKRMLSNRESARRSRKRK
4	50	56	RRSRKRK
5	50	57	RRSRKRKQ
6	52	57	SRKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75390.1	6e-46	bZIP family protein