PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc019562.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 310aa MW: 34814.4 Da PI: 4.7112

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc019562.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.6	4.7e-13	129	176	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + h +Er+RR+++N f llP++ kK++Ka++Le A++YI++Lq Cse_sc019562.1_g020.1 129 QDHVLAERKRREKLNRQFISMSALLPNL-----KKMDKASVLEDATNYIRELQ 176 56999*********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 310 aa Download sequence
MDLSSMWLPE LEIEDGGFMT QYDNMCKPYD MVDKLISDSY SSENIQEKEF SIDRFFQTPS 60 RFEEPTEINL SSTPNTIAAT THSSFNTFTI SFRDIKAKEE ISPSDDSLGY EFAGTGKAPI 120 IARTPLQAQD HVLAERKRRE KLNRQFISMS ALLPNLKKMD KASVLEDATN YIRELQDRVK 180 ELEALSGLKR KDTKDILVAL KRYRLSRDEE DDSSLIETNS GDHSAGVLSE SSAEIEVRIS 240 GGSVLVRIYS HKTYSLTVKV LSQMQRLGIN IISSSTMPFA NTITVITIVA QIDEDFVLTA 300 ADLVSKLQLA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	135	140	ERKRRE
2	136	141	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	2e-39	bHLH family protein