PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc019397.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 394aa MW: 45123.3 Da PI: 6.0562

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc019397.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.5	9.2e-52	18	146	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWka 85 +ppGfrFhPt+eel+++yL+kkv+ +k++l +vi++vd++k+ePwd+++k+k +++wyfFs++dkky+tg+r+nrat++g+Wka Cse_sc019397.1_g040.1 18 VPPGFRFHPTEEELLHYYLRKKVAYEKIDL-DVIRDVDLNKLEPWDIQEKCKIgstPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKA 104 69**************************.9***********964444222455************************* PP NAM 86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 tg+dk ++s + + +g++ktLvfykgrap+g+k+dW+mheyrl Cse_sc019397.1_g040.1 105 TGRDKVIYS-SVTRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL 146 *****.8889*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MSEEEMSLSV NVNGQSKVPP GFRFHPTEEE LLHYYLRKKV AYEKIDLDVI RDVDLNKLEP 60 WDIQEKCKIG STPQNDWYFF SHKDKKYPTG TRTNRATAAG FWKATGRDKV IYSSVTRIGM 120 RKTLVFYKGR APHGQKSDWI MHEYRLDDNT IGNQDACGPN LCDSTQEDGW VVCRVFKKKN 180 YHKSLESPQR SLSGSMDSRT QLQSLNKDGV LDQLLMYMGS NRSCKQEIES LTANHNVMQQ 240 LVTPINERFY QLPRLDSPTM TMSPHYSSVS ANFNQELSFK PHVTDFLTEA DQPTNMDHDS 300 RERLDNWADL ERLVATPLNV QVDSSKQLYS CYGEPNENFC FSLDNDEQEP PHLGDSTTTG 360 RAKHIVYTSE IDLWSFAQSS SSSSSPDPLC HLSV

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MSEEEMSLSV NVNGQSKVPP GFRFHPTEEE LLHYYLRKKV AYEKIDLDVI RDVDLNKLEP  60
WDIQEKCKIG STPQNDWYFF SHKDKKYPTG TRTNRATAAG FWKATGRDKV IYSSVTRIGM  120
RKTLVFYKGR APHGQKSDWI MHEYRLDDNT IGNQDACGPN LCDSTQEDGW VVCRVFKKKN  180
YHKSLESPQR SLSGSMDSRT QLQSLNKDGV LDQLLMYMGS NRSCKQEIES LTANHNVMQQ  240
LVTPINERFY QLPRLDSPTM TMSPHYSSVS ANFNQELSFK PHVTDFLTEA DQPTNMDHDS  300
RERLDNWADL ERLVATPLNV QVDSSKQLYS CYGEPNENFC FSLDNDEQEP PHLGDSTTTG  360
RAKHIVYTSE IDLWSFAQSS SSSSSPDPLC HLSV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	1e-110	NAC family protein