PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc019362.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GRAS
Protein Properties Length: 514aa    MW: 57209.2 Da    PI: 4.8103
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc019362.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3634.2e-1111204902374
                   GRAS   2 velLlecAeavssgdlelaqalLarlsel...aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfse 86 
                             ++L+ecA++++s d ++  + L+rl++    +s +gdp++R+++yf+ AL++r++     + +++   ++     +e +  +k++++
  Cse_sc019362.1_g030.1 120 LKTLTECAKVMES-DPAKSLQSLTRLRDSltlSSTAGDPTERVTFYFADALNRRVTP----TRQTVDEVTS----PEEFTLTYKALND 198
                            689******8777.66666777888887667799**********************9....3333333333....46778999***** PP

                   GRAS  87 vsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAee 171
                            ++P++kf+hltaNqaIlea+e+ +++Hi+Df+i qG+QW+aLlqaLa+Rp+g+p ++Ri g+ +   g      l +tg+rL++fA+ 
  Cse_sc019362.1_g030.1 199 ACPYFKFAHLTANQAILEATENVDKIHIVDFGIVQGVQWAALLQALATRPAGKPsMIRISGIPAVILGskPGSDLLATGNRLREFAKV 286
                            **************************************************7777599******976667788999************* PP

                   GRAS 172 lgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerfle 259
                            l+++fef++ + k +edl+ +++ +k gE laVn++lql++lld+s++ +   ++ Lk+ ksl+P +v++ e ea++n+  F++rf+ 
  Cse_sc019362.1_g030.1 287 LDLNFEFQP-ILKPIEDLNESSFWIKDGEFLAVNFMLQLYNLLDDSANCNA-VEKALKMAKSLNPSLVTLGEYEASLNKVGFFQRFST 372
                            *********.7**********************************999999.9*********************************** PP

                   GRAS 260 aleyysalfdsleaklpreseerikvErellgreivnvvacegae.rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk. 345
                            al+yysalfdsle +++r+s+eri vE+ l+gr+i +v+  e+   rrer+e +e+Wr +++ +GF++v++s++a++qa+ ll  ++ 
  Cse_sc019362.1_g030.1 373 ALSYYSALFDSLEPNMSRDSSERIQVEKLLFGRRIADVIGYEEVGrRRERMEGKEQWRIMMQGSGFETVKFSNYAVSQARILLWSYNy 460
                            ***************************************999876599***************************************9 PP

                   GRAS 346 sdgyrveeesgslv.lgWkdrpLvsvSaWr 374
                            s+ y++ +++  ++ l W+d pL+svS+Wr
  Cse_sc019362.1_g030.1 461 SEMYNLIDDDRGFLsLAWNDVPLISVSSWR 490
                            999**9877666666**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 514 aa     Download sequence    
MPLGFSLTIT IQLGLGLGFR FSDFVAASGS VGEFDTDEWM ESLIDSTTAS STWQPSPDFT  60
LYGGGEPFYL HAPPSTAAMG INSGHMLPPE EKEVKPEKIQ IPPPPPVTTS PELVKTKPLL  120
KTLTECAKVM ESDPAKSLQS LTRLRDSLTL SSTAGDPTER VTFYFADALN RRVTPTRQTV  180
DEVTSPEEFT LTYKALNDAC PYFKFAHLTA NQAILEATEN VDKIHIVDFG IVQGVQWAAL  240
LQALATRPAG KPSMIRISGI PAVILGSKPG SDLLATGNRL REFAKVLDLN FEFQPILKPI  300
EDLNESSFWI KDGEFLAVNF MLQLYNLLDD SANCNAVEKA LKMAKSLNPS LVTLGEYEAS  360
LNKVGFFQRF STALSYYSAL FDSLEPNMSR DSSERIQVEK LLFGRRIADV IGYEEVGRRR  420
ERMEGKEQWR IMMQGSGFET VKFSNYAVSQ ARILLWSYNY SEMYNLIDDD RGFLSLAWND  480
VPLISVSSWR GLNVEKLAET VPEVQVALQS KSKH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66770.11e-145GRAS family protein