PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc019334.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 883aa MW: 100170 Da PI: 9.0595

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc019334.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	52.1	2.2e-16	143	236	3	90
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 Y +YA+++GF vrks +k+ r+g ++++ +vC++eg ++ + + ++k++r+++ + tgCka+++ + + k+++t +++ Cse_sc019334.1_g010.1 143 YMKYASKAGFVVRKSCQKRL-RSGIVKQKYLVCNREGCPKGIHVNtldlenSDKQKRSSNLHITGCKARVMFEVIPgSTKYKLTVFDS 229 99**********998887.8898*********99988888999888899999999***********9******* PP FAR1 84 eHnHela 90 HnHel Cse_sc019334.1_g010.1 230 IHNHELE 236 ***96 PP

Sequence ? help Back to Top
Protein Sequence Length: 883 aa Download sequence
VFLSIFSFFS SSSSDSIPNY SVSSDPSSSI TESATESDRS SSNPSSSITE SVVVSVTESA 60 SEDVVVSDDV SAKYTEEIVA YEHGDESVAI KKRNALKTPE SFSTHSNFDT PGGTVYYIPK 120 VPVDVLLAKG NVFNSVDECI SAYMKYASKA GFVVRKSCQK RLRSGIVKQK YLVCNREGCP 180 KGIHVNTLDL ENSDKQKRSS NLHITGCKAR VMFEVIPGST KYKLTVFDSI HNHELERKEY 240 KHLSKTERQL TYAEQLFIVK AASVNIGATR AHHLLTGLKG SYLLVHGTTV DFKNFFRSVN 300 CYIGDSDAQM LIAKMENRQK HVPDFSFDYL VKNAKLSAIF RADEVSKYNY KEFCDVVSFD 360 ATYMTNKYKM MFVPFTAIDN HRKCVTVAAG LLKNETANSY IWLLKAFIKA FGKAPSIVVT 420 DQDGAMRKAI EQEFAGSKHR LYKMMFVTFI AIDNHRKCVT VAVGLLKNET ANSYIWLLKA 480 FIKAFGKAPS IVVTDQDGAM RKAIEQEFAG SKHRLCMWHI TQKLPGKICS KIYDHTDFKR 540 KFNQIVWNMY IGPDEFEYQW GKSESENSFF YHFTNSGSTL MNFMNCFETA MEKQRHIQER 600 LDHKSIDSVP TLRTYLKIER HASKVYTRPL FELVQAEIFV GTWFCQIDTK SLLEGSEVSV 660 IKEKKFVDEL MEKKKAKKKE KSKKKGDDND KNKEEEEPIN LFYREDGLYK NANVEMIPNQ 720 YLLRRWTKNL IPAGLRNKRN RYGEKNEIVE NYANEATSIV DHCVHMLSKD ETRLAAFIEK 780 FKLLKLDVEA DCPNPPSKDK LDNLEELVGV PKPPVVAVKN SSGCKPKGRE KSRIKGGKEQ 840 AIDESSINRN SCSICGAKDG HNKRTCPNKY RVQDDLVQSE ATS

Sequence ? help Back to Top

Protein Sequence Length: 883 aa Download sequence

VFLSIFSFFS SSSSDSIPNY SVSSDPSSSI TESATESDRS SSNPSSSITE SVVVSVTESA  60
SEDVVVSDDV SAKYTEEIVA YEHGDESVAI KKRNALKTPE SFSTHSNFDT PGGTVYYIPK  120
VPVDVLLAKG NVFNSVDECI SAYMKYASKA GFVVRKSCQK RLRSGIVKQK YLVCNREGCP  180
KGIHVNTLDL ENSDKQKRSS NLHITGCKAR VMFEVIPGST KYKLTVFDSI HNHELERKEY  240
KHLSKTERQL TYAEQLFIVK AASVNIGATR AHHLLTGLKG SYLLVHGTTV DFKNFFRSVN  300
CYIGDSDAQM LIAKMENRQK HVPDFSFDYL VKNAKLSAIF RADEVSKYNY KEFCDVVSFD  360
ATYMTNKYKM MFVPFTAIDN HRKCVTVAAG LLKNETANSY IWLLKAFIKA FGKAPSIVVT  420
DQDGAMRKAI EQEFAGSKHR LYKMMFVTFI AIDNHRKCVT VAVGLLKNET ANSYIWLLKA  480
FIKAFGKAPS IVVTDQDGAM RKAIEQEFAG SKHRLCMWHI TQKLPGKICS KIYDHTDFKR  540
KFNQIVWNMY IGPDEFEYQW GKSESENSFF YHFTNSGSTL MNFMNCFETA MEKQRHIQER  600
LDHKSIDSVP TLRTYLKIER HASKVYTRPL FELVQAEIFV GTWFCQIDTK SLLEGSEVSV  660
IKEKKFVDEL MEKKKAKKKE KSKKKGDDND KNKEEEEPIN LFYREDGLYK NANVEMIPNQ  720
YLLRRWTKNL IPAGLRNKRN RYGEKNEIVE NYANEATSIV DHCVHMLSKD ETRLAAFIEK  780
FKLLKLDVEA DCPNPPSKDK LDNLEELVGV PKPPVVAVKN SSGCKPKGRE KSRIKGGKEQ  840
AIDESSINRN SCSICGAKDG HNKRTCPNKY RVQDDLVQSE ATS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-31	FAR1 family protein