PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc019314.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Nin-like

Protein Properties

Length: 803aa MW: 90891.7 Da PI: 8.8492

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc019314.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	35	2.8e-11	533	578	3	48
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48 +++++e ++++ +pi +AAk Lgv+ ++LKr CR + + WP k Cse_sc019314.1_g040.1 533 DSLTMEAVNNQVGKPIDEAAKILGVSRSTLKRFCRDHDMTSWPLPK 578 6899***************************************765 PP

Sequence ? help Back to Top
Protein Sequence Length: 803 aa Download sequence
MTIEKTHLIV LVAVISVKKV SVYGPSQLFP FELISDGFEH RDHNVYPHGL KIPDKIKLAL 60 KLLHFREARV LVQFWSPHIT GDHKVLATRD QPFGVGVIDE ELYSYRKESE RYSCVLDNNH 120 KEEDLHPTAR VFRHGLPEWT TNLTNYLPKH FRQQEYALQC NLHGYLALPV FNSSTPRECL 180 GVLELLTSSK YRSYAYEVRQ LYIALKAAGL TTTQAFDRPT FNVPNEHMNS ELEKIFSILR 240 VVCEIHRLPL AQTWAISPSS SVASHEQILK KSCNSFDSRC LGKTCLSTAA LPFHVQDLGV 300 WPFRKACKEL HLDKSCSFVG KVLSSRGSCF CEDVTKLSEE EYPLVHYAHL NGITSCFAIY 360 LHSLESKADY VLEFFLPLNI EDSRHVQNLV QTLKQHIEMA SVFELGDKSP IQVVGPSREA 420 RSLFLDTDPQ SAIISSTITT MTKIPERVSS DSESFVADLA KSDSTHVLNQ LSPKQDFLDN 480 NGGAITSSAI VIQDDVIRDD IDVVGAGNDE NATSNHDXET SNGLKRGRKR KIDSLTMEAV 540 NNQVGKPIDE AAKILGVSRS TLKRFCRDHD MTSWPLPKHN KKTARVTDSK LSQKSRSIQP 600 LQRSSSVRFG FFAAVILLVR VKRWSCSSKN HGFSGKWWSC GKHSYLPFKL DSMYQVARLI 660 LSLKRWKNKN STKHVLQNRD HPTDSTEKPK FKANIINPGS SPVYASPKQI VARVVSDIKK 720 VTVKATFKED MLKFQFPTSS GLSELENEVA QRIKFKNKRV RLKYRDEDED MILLACDADL 780 HHLLGFSTSN NCIIKLSIQL VDE

Sequence ? help Back to Top

Protein Sequence Length: 803 aa Download sequence

MTIEKTHLIV LVAVISVKKV SVYGPSQLFP FELISDGFEH RDHNVYPHGL KIPDKIKLAL  60
KLLHFREARV LVQFWSPHIT GDHKVLATRD QPFGVGVIDE ELYSYRKESE RYSCVLDNNH  120
KEEDLHPTAR VFRHGLPEWT TNLTNYLPKH FRQQEYALQC NLHGYLALPV FNSSTPRECL  180
GVLELLTSSK YRSYAYEVRQ LYIALKAAGL TTTQAFDRPT FNVPNEHMNS ELEKIFSILR  240
VVCEIHRLPL AQTWAISPSS SVASHEQILK KSCNSFDSRC LGKTCLSTAA LPFHVQDLGV  300
WPFRKACKEL HLDKSCSFVG KVLSSRGSCF CEDVTKLSEE EYPLVHYAHL NGITSCFAIY  360
LHSLESKADY VLEFFLPLNI EDSRHVQNLV QTLKQHIEMA SVFELGDKSP IQVVGPSREA  420
RSLFLDTDPQ SAIISSTITT MTKIPERVSS DSESFVADLA KSDSTHVLNQ LSPKQDFLDN  480
NGGAITSSAI VIQDDVIRDD IDVVGAGNDE NATSNHDXET SNGLKRGRKR KIDSLTMEAV  540
NNQVGKPIDE AAKILGVSRS TLKRFCRDHD MTSWPLPKHN KKTARVTDSK LSQKSRSIQP  600
LQRSSSVRFG FFAAVILLVR VKRWSCSSKN HGFSGKWWSC GKHSYLPFKL DSMYQVARLI  660
LSLKRWKNKN STKHVLQNRD HPTDSTEKPK FKANIINPGS SPVYASPKQI VARVVSDIKK  720
VTVKATFKED MLKFQFPTSS GLSELENEVA QRIKFKNKRV RLKYRDEDED MILLACDADL  780
HHLLGFSTSN NCIIKLSIQL VDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	2e-82	Nin-like family protein