PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc019199.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NF-YA
Protein Properties Length: 297aa    MW: 32992.6 Da    PI: 9.3713
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc019199.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA102.92.9e-32174230158
              CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                            dep+YVNaKQy++Il+RRq Rakle+++k  +k+rkpylheSRh hAl+R+Rg+gGrF
  Cse_sc019199.1_g040.1 174 DEPIYVNAKQYNAILRRRQYRAKLEAQNKP-SKARKPYLHESRHAHALKRARGPGGRF 230
                            79****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MRELLKKDSE PCVAGYASQR GGADSFVEQS TLSNNLSLKM GTSMPRNQNT KKLGIQFQFQ  60
DQESSSTQST CSYPEVASAG DSYPYDENKF SVQSGHRAHE EGSVGSALPM VTQDYAVASH  120
GDHRNPYACF PVMYPDPYHR GMLPTYGPQT MLPHPHGMNI MSARVPLPLD YAQDEPIYVN  180
AKQYNAILRR RQYRAKLEAQ NKPSKARKPY LHESRHAHAL KRARGPGGRF LNLKKTQETQ  240
PGGSINARDA KNHQGGGTCS DTTSASNGDN FIHQQENRFS TCGGPNNGVT HHMFRFQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14020.14e-45NF-YA family protein