PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc019177.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 461aa MW: 51849 Da PI: 8.2484

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc019177.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	52.6	1.5e-16	130	223	3	90
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 Y +YA+++GF vrks +k+ r+g ++++ +vC++eg +++ + + ++k++r+++++ t Cka+++ ++ + k++++ +++ Cse_sc019177.1_g030.1 130 YMKYASKAGFVVRKSCQKRL-RSGIVKQKYLVCNREGCPKRIHVDtldlenSDKQKRSSNVHITVCKAHVMFELIPgSTKYKLSVFDS 216 99**********998887.8898**********999888899998888999999999*********9******* PP FAR1 84 eHnHela 90 HnHel Cse_sc019177.1_g030.1 217 IHNHELE 223 ***96 PP

Sequence ? help Back to Top
Protein Sequence Length: 461 aa Download sequence
MDLIPNSSVS SDPSSSITES ATESDRSSSD PSSSITESVI VSVTESASED VVVSDDVSAK 60 YTEEIVAYEH GDESAAIKKL NALKTPESFS THSNFDTPGG MVYYIPKVPV DVLLAKGNVF 120 NSVDECISAY MKYASKAGFV VRKSCQKRLR SGIVKQKYLV CNREGCPKRI HVDTLDLENS 180 DKQKRSSNVH ITVCKAHVMF ELIPGSTKYK LSVFDSIHNH ELERKEYKHL SKTERQLTYA 240 EQLFIVKAAS VNIGATRAHH LLTGLKGSYL LVHGTTVDFT NFFRSVNCYI GDSDAQMLIA 300 KMENRQKHVP DFSFDYLVEN AELSVIFWAD EVSKYSYKEF CDVVSFDATY RTNKYKMMFV 360 PFTAIDNHRK CVTVAAGLLK NETANSYIWL LKAFIKAFGK APSIVVTYQD GAMRKAIEQE 420 FAGSKHRLCM WHITQKLPGK QNLYNSTYNP KSHPQMCRQI H

Sequence ? help Back to Top

Protein Sequence Length: 461 aa Download sequence

MDLIPNSSVS SDPSSSITES ATESDRSSSD PSSSITESVI VSVTESASED VVVSDDVSAK  60
YTEEIVAYEH GDESAAIKKL NALKTPESFS THSNFDTPGG MVYYIPKVPV DVLLAKGNVF  120
NSVDECISAY MKYASKAGFV VRKSCQKRLR SGIVKQKYLV CNREGCPKRI HVDTLDLENS  180
DKQKRSSNVH ITVCKAHVMF ELIPGSTKYK LSVFDSIHNH ELERKEYKHL SKTERQLTYA  240
EQLFIVKAAS VNIGATRAHH LLTGLKGSYL LVHGTTVDFT NFFRSVNCYI GDSDAQMLIA  300
KMENRQKHVP DFSFDYLVEN AELSVIFWAD EVSKYSYKEF CDVVSFDATY RTNKYKMMFV  360
PFTAIDNHRK CVTVAAGLLK NETANSYIWL LKAFIKAFGK APSIVVTYQD GAMRKAIEQE  420
FAGSKHRLCM WHITQKLPGK QNLYNSTYNP KSHPQMCRQI H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-37	FAR1 family protein