PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc019136.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family B3
Protein Properties Length: 486aa    MW: 56455.2 Da    PI: 4.7596
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc019136.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3474.5e-1522107898
                            -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
                     B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                            s+  k + + +pkkf+e++g     + ++tl+ ++g  W+v l  +k++g+ + + +GW eF k  gLk g  ++Fk++g s+f  +v
  Cse_sc019136.1_g020.1  22 SNDIKPSTIKIPKKFTEKNGRT--MQDKVTLKVPNGDIWQVGL--KKSKGGeICFDNGWMEFSKCYGLKFGNLLMFKYEGCSSF--RV 103
                            556666779**********866..4459***************..77776679*************************987888..66 PP

                            EEE- CS
                     B3  95 kvfr 98 
                             +f+
  Cse_sc019136.1_g020.1 104 FIFD 107
                            6665 PP
2B358.99.3e-19185274499
                            E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
                     B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                             +++++   ++ +++p  f++ ++g    + + +l+++s +sW+v +  +k +g +++++GW++Fv++n L+ gDf++F+++g  +f 
  Cse_sc019136.1_g020.1 185 GMLTKYIEGKSGVRIPPAFIKYFEGC--LPLEFILMTSSRKSWKVDM--NKIDGYVYFKRGWEKFVQDNSLEFGDFLIFYYNGGPKF- 267
                            566777778888********666766..7889***************..********************************998888. PP

                            .EEEEE-S CS
                     B3  92 lvvkvfrk 99 
                             +v++f k
  Cse_sc019136.1_g020.1 268 -YVSIFGK 274
                            .9999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 486 aa     Download sequence    
MESLNRSSSP ENPLNFITII LSNDIKPSTI KIPKKFTEKN GRTMQDKVTL KVPNGDIWQV  60
GLKKSKGGEI CFDNGWMEFS KCYGLKFGNL LMFKYEGCSS FRVFIFDPNA CEIVYPRKLD  120
SCKEVEFDHD SKTSSSWDQD QDQETDIKII GECSSTKRVN SDERRRELEA AKANFKSSKP  180
FFVVGMLTKY IEGKSGVRIP PAFIKYFEGC LPLEFILMTS SRKSWKVDMN KIDGYVYFKR  240
GWEKFVQDNS LEFGDFLIFY YNGGPKFYVS IFGKNNCPKE IEATIEKSEK QPIYIQEDEA  300
NTTEENKMSV EDCNLSFDEE KKTSVEDCNL SFDEEKKNAV EDCNLSFDEE KKIAVEDCNL  360
SFDEEKKISD EDYNLSFDEE KKIPVKNWNL SFEVTIQQRN MTMGYILVPK VFYDGVKEYR  420
PLAKLQHVER TWDVKVIHYG DRVRFNDGWT LFALENCLAV GDVCCFKMLD IQPEFYLLDV  480
SICREI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01580.11e-20B3 family protein