PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc019066.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB | ||||||||
Protein Properties | Length: 253aa MW: 28340.7 Da PI: 6.146 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.2 | 2.9e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgrWTteEd +l+ +++ G g+W++ ++ g+ R++k+c++rw +yl Cse_sc019066.1_g030.1 14 RGRWTTEEDNILLSYIQANGEGSWRALPKNAGLLRCGKSCRLRWINYL 61 8*******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 52.7 | 9.8e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ ++eE++l+++ ++ lG++ W++Ia +++ gRt++++k++w+++l Cse_sc019066.1_g030.1 67 RGNISPEEEDLILKMHASLGNK-WSLIAGHLP-GRTDNEIKNYWNSHL 112 7899******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MGRAPCCQKV GLRRGRWTTE EDNILLSYIQ ANGEGSWRAL PKNAGLLRCG KSCRLRWINY 60 LKSDVKRGNI SPEEEDLILK MHASLGNKWS LIAGHLPGRT DNEIKNYWNS HLSRKIAQNT 120 AKRTSTKKTR KPRKTSSLSS KQSNMNPSSD GLLADPNGTS PLMLSTNTEN ELVQSDLATA 180 SSSMGDSNEE NSNEHECDWD WDFEIDNSMV GLGLGFEGEN FDGDVLSWPW ESPTTQVGLD 240 MKKQDEMIAW LMS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47460.1 | 2e-70 | MYB family protein |