PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc019012.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 505aa MW: 56836.4 Da PI: 6.8775

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc019012.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.7	8.8e-13	359	405	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq Cse_sc019012.1_g020.1 359 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAITYITDLQ 405 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 505 aa Download sequence
MKSEASMIGE ENISEEDKSI ISSVLGSKAF NYLLSTSFAN ECSFTSLAND ENLQHKLSHL 60 VDNPNSARFS WNYAIFWQVS RSKSGELVLG WGDGSCREPK EGEEFDIGRI LRFRLENDEK 120 QQMMKKNVLQ KVHGLFGGLD EDNYAYGLDK VTDTEMFFLL SMYFLFRNGE GGPGRCFGAG 180 RDLWISDALS SGSDYCFRSN LAKAAGIQTV VMVPTDIGVL EVGSVRSIPE NPSVLQSIRA 240 SFSGNKITLT NGYGHPDRTI STIKMSKIFG QDLSSGLNQP QFREKIAVRK PEEPRVPFSN 300 WAKKPGPQLQ IDFTGITESK VSDECLVRDD REMVSMITDE KRPRKRGRKP ANGREEPLNH 360 VEAERQRREK LNQRFYALRA VVPNISKMDK ASLLGDAITY ITDLQKKLKE MESERQSPNY 420 KVCLDKIEVQ ATENEVVVRV TSPLEAHPVS KVIQTFEESK IKVVESKMNA INDMMFHTFV 480 VKSQGPEQLT KESLISAFSR ETSSS

Sequence ? help Back to Top

Protein Sequence Length: 505 aa Download sequence

MKSEASMIGE ENISEEDKSI ISSVLGSKAF NYLLSTSFAN ECSFTSLAND ENLQHKLSHL  60
VDNPNSARFS WNYAIFWQVS RSKSGELVLG WGDGSCREPK EGEEFDIGRI LRFRLENDEK  120
QQMMKKNVLQ KVHGLFGGLD EDNYAYGLDK VTDTEMFFLL SMYFLFRNGE GGPGRCFGAG  180
RDLWISDALS SGSDYCFRSN LAKAAGIQTV VMVPTDIGVL EVGSVRSIPE NPSVLQSIRA  240
SFSGNKITLT NGYGHPDRTI STIKMSKIFG QDLSSGLNQP QFREKIAVRK PEEPRVPFSN  300
WAKKPGPQLQ IDFTGITESK VSDECLVRDD REMVSMITDE KRPRKRGRKP ANGREEPLNH  360
VEAERQRREK LNQRFYALRA VVPNISKMDK ASLLGDAITY ITDLQKKLKE MESERQSPNY  420
KVCLDKIEVQ ATENEVVVRV TSPLEAHPVS KVIQTFEESK IKVVESKMNA INDMMFHTFV  480
VKSQGPEQLT KESLISAFSR ETSSS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	341	349	KRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46510.1	1e-170	bHLH family protein