PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc018665.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 280aa    MW: 31760.2 Da    PI: 6.8049
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc018665.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.61e-20150201256
                    AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56 
                            +y+GVr+++ +g+++AeIrdp   + k +r++lg+++ta eAaka+++a+ +l+g+
  Cse_sc018665.1_g040.1 150 HYRGVRQRP-WGKFAAEIRDP---NkKGTRVWLGTYDTAIEAAKAYDRAAFRLRGN 201
                            8********.**********9...4345**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MASHDESSAL DLIRQHLLID DSSFLQTYSL LSDHKPKIEP VIETNSQEKN KDKSSNNQEQ  60
SEHVSIAGYQ HFALNLNPFH AHNKHNNELK PQVLQPIPKT NSQEKNKNPS KNNTPNNNLK  120
ESDQSESELV NIVSYQHFTK NLKQHDANKH YRGVRQRPWG KFAAEIRDPN KKGTRVWLGT  180
YDTAIEAAKA YDRAAFRLRG NKAILNFPLE IGSSDDHDEK VSLGRKRNAQ DIEVDMIQTR  240
KEMKVEQVVL GDGDGEDNGE VNNMLSSYPS MELTSGCMVT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.12e-40ERF family protein