PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc018600.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 295aa    MW: 34049.2 Da    PI: 8.4532
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc018600.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.94e-172067148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           rg+WT eEd ll++++  +G g+W++ a+  g++Rt+k+c++rw++yl
  Cse_sc018600.1_g010.1 20 RGPWTLEEDNLLIRYISCHGEGRWNSLAKAAGLKRTGKSCRLRWLNYL 67
                           89********************************************97 PP
2Myb_DNA-binding50.25.7e-1673116146
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                            rg+ T++E++ +++++ ++G++ W++Ia++++ gRt++++k++w++
  Cse_sc018600.1_g010.1  73 RGNLTPQEQLVILELHSKWGNR-WSKIAQHLP-GRTDNEIKNYWRT 116
                            7999******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MRTTSKMANS CKDEYDQLKR GPWTLEEDNL LIRYISCHGE GRWNSLAKAA GLKRTGKSCR  60
LRWLNYLKPD TKRGNLTPQE QLVILELHSK WGNRWSKIAQ HLPGRTDNEI KNYWRTRVQK  120
QARHLKIDSN SKRFVEALQR FWMPRLLEKV EQTSSSSSAS TASTSTLETG QNKLSPYHPR  180
AKQTLLSTVS SPSQLSEQEF INPSSSICAP DSSGKMLSQL PDMSQLYEDS VFYNSSLQNN  240
DCYNVEISEF DMLDFGQPDR MPVSNFHVAD TDWISSGDMA VDTYWNMDEL WQFRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68320.12e-85MYB family protein