PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc018311.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | B3 | ||||||||
Protein Properties | Length: 246aa MW: 28448.9 Da PI: 10.1083 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 57.2 | 3e-18 | 10 | 99 | 1 | 95 |
EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.s 88 ffkvl++++ l lp fa e+ ++ k+e++t++le+ sg +W+vk+ k +++++l +GW +F k+n+Lk Dfv+F l++ Cse_sc018311.1_g020.1 10 FFKVLLTESEVV---LQLPSAFAIEYfEKGKNETQTIMLETMSGDKWNVKY--AKIKDEHFLVDGWFDFMKENRLKKYDFVIFLLKSPhP 94 677776666655...56**********55556778****************..*******************************987545 PP EE..EEE CS B3 89 efelvvk 95 ++ ++k Cse_sc018311.1_g020.1 95 NT--HFK 99 55..444 PP | |||||||
2 | B3 | 33.8 | 5.9e-11 | 150 | 244 | 1 | 97 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr...yvltkGWkeFvkangLkegDfvvFkld 85 f+++ +++++++++ l l ++f ee g+ ++ +l++++g +W+vk+++ k+++ + ++ W++F k+n++k gD++ ++++ Cse_sc018311.1_g020.1 150 FVTKIIQKSYFTERVLPLTRQFGEETGIGCQG--CAKLTNKKG-EWQVKVSMVKQGKFqkpRIVGSQWSKFLKDNKVKMGDTCKITHV 234 78899999999**99***********877544..588888665.8*****9955555556778899********************87 PP SSSEE..EEEEE CS B3 86 grsefelvvkvf 97 +++ l+++v+ Cse_sc018311.1_g020.1 235 KDNV--LHIRVI 244 6444..477776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MNFDKQSGGF FKVLLTESEV VLQLPSAFAI EYFEKGKNET QTIMLETMSG DKWNVKYAKI 60 KDEHFLVDGW FDFMKENRLK KYDFVIFLLK SPHPNTHFKV IFFGPEGCLT QPPNPRNTAD 120 TAKNVEKETS EDDSENMNMN QSKNKNKKSF VTKIIQKSYF TERVLPLTRQ FGEETGIGCQ 180 GCAKLTNKKG EWQVKVSMVK QGKFQKPRIV GSQWSKFLKD NKVKMGDTCK ITHVKDNVLH 240 IRVIKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G26680.1 | 3e-12 | B3 family protein |