PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc018258.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C2H2
Protein Properties Length: 148aa    MW: 16229.2 Da    PI: 6.7874
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc018258.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2157.3e-054264123
                           EEETTTTEEESSHHHHHHHHHHT CS
                zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                           y+C+ C++ F++   L  H++ H
  Cse_sc018258.1_g020.1 42 YECNFCKRGFTNAQALGGHMNIH 64
                           99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    
MEPNHSVSES SDELIASTTP VEGQQQNSSQ VTSVALGVVR SYECNFCKRG FTNAQALGGH  60
MNIHRKHKAK LKESFLSPPP KCPFSNANLQ GENIPLPLFG DGSSDSRNVH QESVTKDPTS  120
PAQEVDLELR LGHVELPENK IAAMRKFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53820.15e-20C2H2 family protein