PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc018234.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C3H
Protein Properties Length: 294aa    MW: 32518.2 Da    PI: 7.5023
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc018234.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH19.12.3e-06219239526
                            --SGGGGTS--TTTTT-SS-SS CS
                zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                             Cr f+  G+C+ Gd C+F+H+
  Cse_sc018234.1_g010.1 219 VCRSFSL-GFCHWGDECRFIHD 239
                            6******.*************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MTNSTPPPQP PTLTLVEKLY AVNNINNVVP IKLNIDELNY SSWCYFFKIH CDNFGVLKHI  60
EGANEDVTSS NPPPPTQEWK NPDSIRTRTI ALKGELRVIQ MRDLTADAYF RKIESIVTLL  120
NDLGSSMNDD DVVTYAINGL SEKYSNIATI IAHKDPFPDL DSMRSMVITE QMRLNSRSQT  180
ASINTSSSAP QVLLSETSHA NRNQDNRASR DSRTNAPQVC RSFSLGFCHW GDECRFIHDS  240
RRGNTSSGTT GNLSHGANRN TRSSRGSTGT NFGSSLGLFN GSCSQQQLLA LLQA