PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc018186.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | B3 | ||||||||
Protein Properties | Length: 307aa MW: 35056.9 Da PI: 6.7627 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 49.7 | 6.6e-16 | 32 | 123 | 1 | 90 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS..-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesg..rsWevkl..iyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 ff +++ +lks++l++p +f+++ g++++ kt+tl++++g +++ v++ +y + +ry+l+kGW +F+++ ++ +gD +vFk+ Cse_sc018186.1_g030.1 32 FFVMTITQFNLKSCLLRFPVDFVRSVGIDTK--KTITLKSLDGyeKEMPVRVgtKYHYQAKRYFLSKGWTDFARSTNISVGDKCVFKF 117 66777888899***************99954..58888888888888888886577889999*************************9 PP -SSSEE CS B3 85 dgrsef 90 + ++++ Cse_sc018186.1_g030.1 118 ITSEDK 123 976554 PP | |||||||
2 | B3 | 38.7 | 1.8e-12 | 174 | 259 | 8 | 93 |
-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 + +++l+lp +f++ +++ee++ ++ d + r + ++ + +++s +y l+ GW F ++n + egD +vFk+ ++++ ++ Cse_sc018186.1_g030.1 174 ITTIHKSMLRLPSDFVTLSRIDTEENIIIKTLDGNERLMALRSCQQNNSTHYCLSMGWPAFMRSNSISEGDECVFKYLTSEKKMCL 259 55667789********88888888865555555555555555555999999*************************9875555444 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 307 aa Download sequence |
MRVDADDVED DDGIADEDED ETAELVEEDD PFFVMTITQF NLKSCLLRFP VDFVRSVGID 60 TKKTITLKSL DGYEKEMPVR VGTKYHYQAK RYFLSKGWTD FARSTNISVG DKCVFKFITS 120 EDKLCLAKIT KARPTQVDDD DVEVDNGMDD KDTYKDVELV DGVDDGDPFF AMTITTIHKS 180 MLRLPSDFVT LSRIDTEENI IIKTLDGNER LMALRSCQQN NSTHYCLSMG WPAFMRSNSI 240 SEGDECVFKY LTSEKKMCLA KVTKTKTQNR LSSPAKVVKR KKRGRPAKVV KRKRGRAASQ 300 KYDGRKY |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 279 | 294 | KRKKRGRPAKVVKRKR |
2 | 280 | 295 | KRKKRGRPAKVVKRKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31640.1 | 1e-07 | B3 family protein |