PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc018015.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

G2-like

Protein Properties

Length: 495aa MW: 55069.1 Da PI: 6.51

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc018015.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.1	2e-33	62	116	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wtp+LHerF++av+qLGG++kAtPk++l+lm+++gLtl+h+kSHLQkYRl Cse_sc018015.1_g010.1 62 KPRLKWTPDLHERFIDAVNQLGGADKATPKSVLKLMGIQGLTLYHLKSHLQKYRL 116 79****************************************************8 PP
2	Myb_DNA-binding	62.8	6.8e-20	64	115	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT++++e+++dav+qlGg t+k++ + mg +g+tl+++ks++qky+ Cse_sc018015.1_g010.1 64 RLKWTPDLHERFIDAVNQLGGAdkaTPKSVLKLMGiQGLTLYHLKSHLQKYR 115 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 495 aa Download sequence
MKAKYHCNEK KDEWRNELMC LSGFFDSGFP KIQMSITPER QMFLQGGNSR GNSGLVLSTD 60 AKPRLKWTPD LHERFIDAVN QLGGADKATP KSVLKLMGIQ GLTLYHLKSH LQKYRLGKNL 120 CGQPNGGGTN KISMIPQARD TMDETDGIHM SSSSLGPQTN KNLQINEALQ MQIEVQRRLH 180 EQLEVQRHLQ LRIEAQGKYL QAVLEKAQET VGNQNLGTVG LEAAKVQLSE LVSKVSTQHL 240 SSAFSIKDLS NGTYPPTDCS IDSCLTYGES QQIDQEMIGL HLLKKAKYEP ENACELAMAV 300 GLESSEWKTN FGDQGTRSKT ELVKSESVDT SQKFKLPYIE KKLDLNARDE NDVASSMIAQ 360 ARDAMDETDG THMSSSSLGP QTNKYGVSTQ HLHSAFSIKD LSNGPYTQTD CSIDSCLAYG 420 ESQQIDKEII CLHLLNKAKY EPENACDLAM AVGLESSEWK TNFGDQVTRS KTEPNFDTAQ 480 KFKCPYTEKK LHLNA

Sequence ? help Back to Top

Protein Sequence Length: 495 aa Download sequence

MKAKYHCNEK KDEWRNELMC LSGFFDSGFP KIQMSITPER QMFLQGGNSR GNSGLVLSTD  60
AKPRLKWTPD LHERFIDAVN QLGGADKATP KSVLKLMGIQ GLTLYHLKSH LQKYRLGKNL  120
CGQPNGGGTN KISMIPQARD TMDETDGIHM SSSSLGPQTN KNLQINEALQ MQIEVQRRLH  180
EQLEVQRHLQ LRIEAQGKYL QAVLEKAQET VGNQNLGTVG LEAAKVQLSE LVSKVSTQHL  240
SSAFSIKDLS NGTYPPTDCS IDSCLTYGES QQIDQEMIGL HLLKKAKYEP ENACELAMAV  300
GLESSEWKTN FGDQGTRSKT ELVKSESVDT SQKFKLPYIE KKLDLNARDE NDVASSMIAQ  360
ARDAMDETDG THMSSSSLGP QTNKYGVSTQ HLHSAFSIKD LSNGPYTQTD CSIDSCLAYG  420
ESQQIDKEII CLHLLNKAKY EPENACDLAM AVGLESSEWK TNFGDQVTRS KTEPNFDTAQ  480
KFKCPYTEKK LHLNA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	1e-107	G2-like family protein