PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc017832.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 503aa MW: 58340 Da PI: 9.3273

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc017832.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	25.8	3.4e-08	50	122	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHe 88 +Y eYA ++ Fs+rks+sk + +g k g +++++k +++ t t+Cka+++ + + ++ +++++++++HnH+ Cse_sc017832.1_g020.1 50 MYLEYALKARFSIRKSTSKCK--KG---------EKDGVNKPRQKC------NSNYTVTDCKACVRFRGIHgTSAFKLYEFVENHNHP 120 788888888888888876655..22.........456777776655......9999*************9************** PP FAR1 89 la 90 l Cse_sc017832.1_g020.1 121 LL 122 95 PP

Sequence ? help Back to Top
Protein Sequence Length: 503 aa Download sequence
VEYSDLDDSE TDDECIPTPK GHKYWIPEVP TDEKPSEGNV FDTFDEAYDM YLEYALKARF 60 SIRKSTSKCK KGEKDGVNKP RQKCNSNYTV TDCKACVRFR GIHGTSAFKL YEFVENHNHP 120 LLDENNTDLL KARRKLDFSD ELFIHRESLS NLGPTKAHRL RVAFMGSYQK VRGKPSDWKN 180 FRRSVNKYIG PRDAQMLICG EVDSDFEFKK LFHKLIWNVF IEPLEFEERR HALIGVANVL 240 SYEDHFAIRK FNAFFRIFSH SGNMLVQFML CFEAAMEKQL YVQRVMDNRT FETTPFMFTD 300 LPIERHACIV YSRSIFSEVH KEILKGLYVC SQISVTSEEG ATVSIIQQKK QNRVVFNAKI 360 PERYVSKRWR KDVFPSHLLD KRHRYEPCIE ETDNIASDIH AIIESCVTEL KTKLDAELPP 420 EKKKPNNEEI YQNLLGVTTP KQVIVKAPEG IRNKGCGTGG GRFIGREKKL KQRPKQKRKG 480 VHAGFVMNKV TTCACAKKMQ RIK

Sequence ? help Back to Top

Protein Sequence Length: 503 aa Download sequence

VEYSDLDDSE TDDECIPTPK GHKYWIPEVP TDEKPSEGNV FDTFDEAYDM YLEYALKARF  60
SIRKSTSKCK KGEKDGVNKP RQKCNSNYTV TDCKACVRFR GIHGTSAFKL YEFVENHNHP  120
LLDENNTDLL KARRKLDFSD ELFIHRESLS NLGPTKAHRL RVAFMGSYQK VRGKPSDWKN  180
FRRSVNKYIG PRDAQMLICG EVDSDFEFKK LFHKLIWNVF IEPLEFEERR HALIGVANVL  240
SYEDHFAIRK FNAFFRIFSH SGNMLVQFML CFEAAMEKQL YVQRVMDNRT FETTPFMFTD  300
LPIERHACIV YSRSIFSEVH KEILKGLYVC SQISVTSEEG ATVSIIQQKK QNRVVFNAKI  360
PERYVSKRWR KDVFPSHLLD KRHRYEPCIE ETDNIASDIH AIIESCVTEL KTKLDAELPP  420
EKKKPNNEEI YQNLLGVTTP KQVIVKAPEG IRNKGCGTGG GRFIGREKKL KQRPKQKRKG  480
VHAGFVMNKV TTCACAKKMQ RIK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	5e-10	FAR1 family protein