PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc017782.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GRAS
Protein Properties Length: 557aa    MW: 62886.9 Da    PI: 5.0492
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc017782.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS4393.4e-1341905573374
                   GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPi 90 
                            +lL+ecA avs+gd e+a++++++l++++s dg+p qR+ ay++eALaar+a s+++lykal+++e +   s+++l+a+++++ev+P+
  Cse_sc017782.1_g010.1 190 DLLFECAIAVSEGDIEEASNMINELRQTVSIDGEPSQRILAYMVEALAARVAASGKGLYKALKCKEPP---SKDRLSAMQVLFEVCPC 274
                            79*****************************************************************9...9**************** PP

                   GRAS  91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpf 176
                            ++f++++aN aIlea+ ge+ vHiiDfdi+qG Q+++Llq+La+  ++ p+lR+Tgv++pes+      l+++g+rL+++Ae l+++f
  Cse_sc017782.1_g010.1 275 FRFGFMAANGAILEAFVGEKNVHIIDFDINQGSQYITLLQTLAET-NSRPHLRLTGVDDPESVqrPVGGLNHIGQRLKELAEMLNLDF 361
                            *******************************************95.778************99888899******************* PP

                   GRAS 177 efnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyy 264
                            ef+  v+ +++ +e+ +L+++pgEa++Vn+++qlh+++desvs+ ++rd++L++vksl+Pk+v+vveq++++n+++Fl+rf ea +yy
  Cse_sc017782.1_g010.1 362 EFTS-VVAATAIIEPGSLNCRPGEAVIVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVEQDVNTNTAPFLQRFHEAYSYY 448
                            ****.7999******************************************************************************* PP

                   GRAS 265 salfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve 352
                            sa+fd+lea+lpres+er++vE+++l+r+ivn++aceg+er+er e  +kW++r+++aGF+  p+sek+++ ++ l+++++++ y+++
  Cse_sc017782.1_g010.1 449 SAMFDCLEATLPRESQERVNVEKQCLARDIVNIIACEGEERIERYEVSGKWKARMMMAGFRVCPISEKVNDMVRKLIKEYSER-YKMK 535
                            *********************************************************************************66.**** PP

                   GRAS 353 eesgslvlgWkdrpLvsvSaWr 374
                             e +++ +gW+d+ L+++SaW+
  Cse_sc017782.1_g010.1 536 VETNAIHFGWEDKVLIVASAWK 557
                            *********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 557 aa     Download sequence    
MHSRSTRPRA RLTTKATVST ELDFGDHLTM IRSVSPYGNR KLYLLNEGKE SSGIPTSLFN  60
NDKQERYSAT QSYSNESYDP AKYFLDSPTE EHLSNLEPEY LLNENFEGLS YDEHKMRLKL  120
QELEHALLDD GNENEDSAPS RSMEIEGEWG YSVHESPKES SSYGSYVSSN SSNKEVSLTT  180
PRSRGNTPKD LLFECAIAVS EGDIEEASNM INELRQTVSI DGEPSQRILA YMVEALAARV  240
AASGKGLYKA LKCKEPPSKD RLSAMQVLFE VCPCFRFGFM AANGAILEAF VGEKNVHIID  300
FDINQGSQYI TLLQTLAETN SRPHLRLTGV DDPESVQRPV GGLNHIGQRL KELAEMLNLD  360
FEFTSVVAAT AIIEPGSLNC RPGEAVIVNF AFQLHHMPDE SVSTVNQRDQ LLRMVKSLNP  420
KLVTVVEQDV NTNTAPFLQR FHEAYSYYSA MFDCLEATLP RESQERVNVE KQCLARDIVN  480
IIACEGEERI ERYEVSGKWK ARMMMAGFRV CPISEKVNDM VRKLIKEYSE RYKMKVETNA  540
IHFGWEDKVL IVASAWK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21450.10.0GRAS family protein