PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc017781.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 703aa MW: 81370.4 Da PI: 6.1508

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc017781.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	76.6	4.8e-24	81	172	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleH 85 ++Y+++A++ GFs+rk++s++s++ g +++r+fvC+++g+++++kk+++++ r r++ r+gC+ak+ ++ke +w+v+++++ H Cse_sc017781.1_g010.1 81 EYYCNFARKNGFSIRKARSTESQNLG-VYRRDFVCYRSGFNQPRKKANVEHPRDRKSVRCGCDAKMYLTKEIvdgVTQWYVSQFSNIH 167 69******************8888.**************************************998766789****** PP FAR1 86 nHela 90 nHel Cse_sc017781.1_g010.1 168 NHELL 172 *96 PP

Sequence ? help Back to Top
Protein Sequence Length: 703 aa Download sequence
MFAAYVILLY EMSTKLLNNI WIRRQQCPCG DWKCYIKYEG DDHTNGGSDL VKSDGATSSV 60 SDVIFTPYVC QIFKTDDEAF EYYCNFARKN GFSIRKARST ESQNLGVYRR DFVCYRSGFN 120 QPRKKANVEH PRDRKSVRCG CDAKMYLTKE IVDGVTQWYV SQFSNIHNHE LLEDDQVRLL 180 PAYRKIQESD QDRIVLLTKA GFPVNRIVKV LELEKGVQPG QLPFIEKDVR NFVRTCKKTV 240 QETDALLTEK KEIDMLALLE ICRVTAQRDD GFVYNYTTDE NGKVENFSWA YGDSIRAFSV 300 FGDVVTFDTT YRSITYNMVL GAWFGIDNQG KPFLLGCVLL QDETSRSFSW ALQTFIRFLR 360 GNHPQTIITD LGSGLGDAIA TELPNTKHVI CIWHVMSKLS SWFSQSLGLQ YPEFKSEFEL 420 VWHLENIEDF ENQWSHLVAR FGVDSDKHAA LLYSYRASWA VAYVRGHFLA RAMTIDYMKS 480 IDKFMKNISS PNSSFKNFFE QVSVAANVAF QNKERIPYLP LKTCLPLEEH ARNILSPYAF 540 NTLQQELVLC MQYATTDMAN GSYLVRHYNK LEGECLVIWI PDNEQVHCSC KEYEHSGILC 600 RHSLRVLVLK NYFQIPEKYY PLRWRLDSSL VLSDDHIMQQ DNNDEYYEAF NSLTSSIYTE 660 SLISKERLSY VHKELTQILE VVRNMPDFDE TALDLAPNNA SEL

Sequence ? help Back to Top

Protein Sequence Length: 703 aa Download sequence

MFAAYVILLY EMSTKLLNNI WIRRQQCPCG DWKCYIKYEG DDHTNGGSDL VKSDGATSSV  60
SDVIFTPYVC QIFKTDDEAF EYYCNFARKN GFSIRKARST ESQNLGVYRR DFVCYRSGFN  120
QPRKKANVEH PRDRKSVRCG CDAKMYLTKE IVDGVTQWYV SQFSNIHNHE LLEDDQVRLL  180
PAYRKIQESD QDRIVLLTKA GFPVNRIVKV LELEKGVQPG QLPFIEKDVR NFVRTCKKTV  240
QETDALLTEK KEIDMLALLE ICRVTAQRDD GFVYNYTTDE NGKVENFSWA YGDSIRAFSV  300
FGDVVTFDTT YRSITYNMVL GAWFGIDNQG KPFLLGCVLL QDETSRSFSW ALQTFIRFLR  360
GNHPQTIITD LGSGLGDAIA TELPNTKHVI CIWHVMSKLS SWFSQSLGLQ YPEFKSEFEL  420
VWHLENIEDF ENQWSHLVAR FGVDSDKHAA LLYSYRASWA VAYVRGHFLA RAMTIDYMKS  480
IDKFMKNISS PNSSFKNFFE QVSVAANVAF QNKERIPYLP LKTCLPLEEH ARNILSPYAF  540
NTLQQELVLC MQYATTDMAN GSYLVRHYNK LEGECLVIWI PDNEQVHCSC KEYEHSGILC  600
RHSLRVLVLK NYFQIPEKYY PLRWRLDSSL VLSDDHIMQQ DNNDEYYEAF NSLTSSIYTE  660
SLISKERLSY VHKELTQILE VVRNMPDFDE TALDLAPNNA SEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	0.0	FAR1 family protein