PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc017607.1_g060.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 428aa MW: 50139 Da PI: 8.7733

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc017607.1_g060.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	29.4	2.6e-09	34	90	39	90
FAR1 39 gkreeekkktekerrtraetrtgCkaklkvkkek.....dgkwevtkleleHnHela 90 gk+e++ + +k +r+r +tr +Ck +++k+++ ++w+vtk+++eHnH l Cse_sc017607.1_g060.1 34 GKPETKVVDYSKPQRNRGSTRRECKSYMRIKLKRineifPEEWQVTKFVTEHNHVLL 90 455555555678899**************99885555689**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MKLLHFDLNE VPMKENIVDE DIDEKKIIDE PFVGKPETKV VDYSKPQRNR GSTRRECKSY 60 MRIKLKRINE IFPEEWQVTK FVTEHNHVLL STQEVRFLPS CRNITIEDEK RILLLKDGGL 120 FVRQIMRLME LEKDVRHGEL PFLCQKYGDV VVFDTTYKVN SYEMPFGVFV GIDNHGRTIL 180 LGCALVRNET TKTFRWLFKV DLAIEDVEQR QMHDTMLEKY RGSYLRSLSP LEEQGHYFLT 240 SFAFKKFQEE FGKAIQYTIQ EENCINFIVK HHKASRVHKV FWDGKIAKCS CKKFEFVGIL 300 CRHILSVFIH KDYFEVPSTY WLSRWRRDEL QLDETSPSPQ EGSSADLTCS NDTIDLVECP 360 PKSKPKGLPK KIRPKGGIEL ITQVRYCGIC KGVGHYFTTC PEREDFSDGN IAPQRAKKKR 420 KSLKKMNI

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MKLLHFDLNE VPMKENIVDE DIDEKKIIDE PFVGKPETKV VDYSKPQRNR GSTRRECKSY  60
MRIKLKRINE IFPEEWQVTK FVTEHNHVLL STQEVRFLPS CRNITIEDEK RILLLKDGGL  120
FVRQIMRLME LEKDVRHGEL PFLCQKYGDV VVFDTTYKVN SYEMPFGVFV GIDNHGRTIL  180
LGCALVRNET TKTFRWLFKV DLAIEDVEQR QMHDTMLEKY RGSYLRSLSP LEEQGHYFLT  240
SFAFKKFQEE FGKAIQYTIQ EENCINFIVK HHKASRVHKV FWDGKIAKCS CKKFEFVGIL  300
CRHILSVFIH KDYFEVPSTY WLSRWRRDEL QLDETSPSPQ EGSSADLTCS NDTIDLVECP  360
PKSKPKGLPK KIRPKGGIEL ITQVRYCGIC KGVGHYFTTC PEREDFSDGN IAPQRAKKKR  420
KSLKKMNI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	8e-29	FAR1 family protein