PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc017602.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB_related

Protein Properties

Length: 445aa MW: 51485.7 Da PI: 6.3662

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc017602.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.6	1.6e-14	291	336	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 r+ +T Ed++++ ++ +lG++ W+ I+++++ gRt++++k+rw++yl Cse_sc017602.1_g020.1 291 RDTFTFHEDDIILTLHGMLGNK-WSQISQHFP-GRTDNEIKNRWLSYL 336 7899****************.*****.**********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 445 aa Download sequence
MDIMKITEEK VEITKINMDI MKITEEGGNN RRKIDLPGHK KMNQEDLKTY VTTIVIKGEI 60 IGLIPIDPTQ RPKSTPIMTR STKVNESTND NEAISHIYVL RTNCDIFTAT PNGKLAFLDF 120 GMMSETPEEA RFAIIGHVVH MVNRDYEAMA RDYYALDFLS PDVDVSPIVP SLRKFFDDAL 180 NSTVSELNFK TIVDGLGAVL YEYPFNPYFA KRLLTDPNPY LRDALIELLF KDGKFSFPFH 240 NESQSIRKAQ AKAQEGLMVT RRRSKTQRVN HEPWSWLLES DSHSCRPGLK RDTFTFHEDD 300 IILTLHGMLG NKWSQISQHF PGRTDNEIKN RWLSYLKKKV DKQTDSSLES SEAYRCRKLP 360 KILFADWLCE KGEGDDGFRL FDEIKTVNDF VNSWDVCNSI LDSFWKESKA AKAELFFEKW 420 WLDEGKYGRP NETTYTIMLN GYCLI

Sequence ? help Back to Top

Protein Sequence Length: 445 aa Download sequence

MDIMKITEEK VEITKINMDI MKITEEGGNN RRKIDLPGHK KMNQEDLKTY VTTIVIKGEI  60
IGLIPIDPTQ RPKSTPIMTR STKVNESTND NEAISHIYVL RTNCDIFTAT PNGKLAFLDF  120
GMMSETPEEA RFAIIGHVVH MVNRDYEAMA RDYYALDFLS PDVDVSPIVP SLRKFFDDAL  180
NSTVSELNFK TIVDGLGAVL YEYPFNPYFA KRLLTDPNPY LRDALIELLF KDGKFSFPFH  240
NESQSIRKAQ AKAQEGLMVT RRRSKTQRVN HEPWSWLLES DSHSCRPGLK RDTFTFHEDD  300
IILTLHGMLG NKWSQISQHF PGRTDNEIKN RWLSYLKKKV DKQTDSSLES SEAYRCRKLP  360
KILFADWLCE KGEGDDGFRL FDEIKTVNDF VNSWDVCNSI LDSFWKESKA AKAELFFEKW  420
WLDEGKYGRP NETTYTIMLN GYCLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48920.1	1e-19	MYB family protein