PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc017564.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 177aa    MW: 20116.2 Da    PI: 5.1122
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc017564.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15e-1990140255
                    AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                            +y+GVr+++ +g+++AeIrd + +g   r++lg+f+++ eAa+a+++a+ +++g
  Cse_sc017564.1_g010.1  90 CYRGVRRRP-WGKFAAEIRDSKRRG--SRVWLGTFDSPIEAAEAYDRAAFAMRG 140
                            7********.**********43243..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MSTPDEVAAL EFIRQHLLDE FESFPIDDHC TTSCCSSIST SHSDCSSSTD SNTYNQTFHI  60
GFYEKEVTKH ELIDVESLKP VERIRREERC YRGVRRRPWG KFAAEIRDSK RRGSRVWLGT  120
FDSPIEAAEA YDRAAFAMRG SKAILNFPLE VANGKNISEG VDDPVTPSSN WNTSVWD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.12e-19ERF family protein