PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc017498.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 249aa    MW: 28583.7 Da    PI: 4.6575
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc017498.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.46.7e-181259148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           +g+WT+eEd +l+++++ +G ++W++ ++  g+ R++k+c++rw +yl
  Cse_sc017498.1_g010.1 12 KGPWTQEEDRILINYINIHGHPNWRALPKLAGLLRCGKSCRLRWTNYL 59
                           79******************************99************97 PP
2Myb_DNA-binding48.52e-1565110148
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                            rg+++ eE+e +++++  lG++ W++Ia++++ gRt++++k+ w+++l
  Cse_sc017498.1_g010.1  65 RGNFSREEEETIIELHGALGNR-WSAIAARLP-GRTDNEIKNVWHTHL 110
                            89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MVRACEKMGL KKGPWTQEED RILINYINIH GHPNWRALPK LAGLLRCGKS CRLRWTNYLK  60
PDIKRGNFSR EEEETIIELH GALGNRWSAI AARLPGRTDN EIKNVWHTHL KKRVNPKPNS  120
KTSELEPKVE ETKQDQEEVV ESSSLDTNSS SQTSYNQVDS PQPSSTDTSS VSTSTNENFC  180
MDDMVLENFP EMDDEFWSEV FSGDNSDEFP MVHENIGQLP SGCVYESNLH DDMDFWFNVF  240
TRGEELPQI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.11e-74MYB family protein