PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc017247.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

DBB

Protein Properties

Length: 280aa MW: 31759.8 Da PI: 5.1799

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc017247.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	21.2	6e-07	4	34	5	35
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHk 35 C+ +e++e++ +C+ ++ lC+ C H+ Cse_sc017247.1_g030.1 4 QCDMCEKQEASVYCTADEASLCHGCDRRVHH 34 7**************************9974 PP
2	zf-B_box	31.8	3e-10	53	91	2	38
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg...Ht 38 ++++C+ +++k++ lfC++++ lC++C +++H g Ht Cse_sc017247.1_g030.1 53 QPPRCDICQDKRAFLFCKEDRAILCRQCDMSIH-GaneHT 91 789******************************.546765 PP

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence
MKIQCDMCEK QEASVYCTAD EASLCHGCDR RVHHANKLAN KHPRFVLNDS SDQPPRCDIC 60 QDKRAFLFCK EDRAILCRQC DMSIHGANEH TQYHNRFLLA GVKLSASSSY YDSSCSSDSN 120 VSSEIDSKKC SHVSKDQNAR ANNNSTSMNR NISDGVSQEE GVSMETSSFS EYLMETLPGW 180 HIDEFLDPSA SHPYEFYEAY DSGTCTLPFM AHESDTNEDF GTLWSEDLGS LVNSSSSSMD 240 HYTSRSSTLS KRLYFFNDME SLNKDQYTFN SSSKRPRQLW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	2e-59	DBB family protein