PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc017226.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 365aa MW: 41106.1 Da PI: 6.8307

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc017226.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.1	1.5e-08	157	200	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 E+ RR+++ ++e L+ l+P+ + +K + a+++ A++YI++L Cse_sc017226.1_g020.1 157 TTEKHRRQQLTGKYEALKCLVPNhP-----GKTDRASVVGDAIRYIHEL 200 67*******************55.....9*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MLDNSDMFEP NSYNLDPNTL SHLLNNQEQQ QINWTNTNNL DVQTNQPDLL NLFQLPKCSS 60 SICFANPSHM DQVQQVMYHD HHGTLLGMHN SNSTNVGVTQ NVPYIRELLN NGFSLNGCST 120 SIFGEMNMVN NGGYDGILEF GKNGGNNKDN VKHFTPTTEK HRRQQLTGKY EALKCLVPNH 180 PGKTDRASVV GDAIRYIHEL KGTVEELKHL VDRKRCNRGR MKKHKTDDDS TPDVESIYRM 240 NNGVVADTTH DQQAYNGNSS SSMRSSMVQR KSKHTEIDVR IIDDEVTIKL VQQKKINCLL 300 LVSKVLDELQ LDLHHVAGGL IGDFYSYLFN TKIYEGSSVY ATAIANKLIE VVDKQYAAIP 360 VTSSY

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MLDNSDMFEP NSYNLDPNTL SHLLNNQEQQ QINWTNTNNL DVQTNQPDLL NLFQLPKCSS  60
SICFANPSHM DQVQQVMYHD HHGTLLGMHN SNSTNVGVTQ NVPYIRELLN NGFSLNGCST  120
SIFGEMNMVN NGGYDGILEF GKNGGNNKDN VKHFTPTTEK HRRQQLTGKY EALKCLVPNH  180
PGKTDRASVV GDAIRYIHEL KGTVEELKHL VDRKRCNRGR MKKHKTDDDS TPDVESIYRM  240
NNGVVADTTH DQQAYNGNSS SSMRSSMVQR KSKHTEIDVR IIDDEVTIKL VQQKKINCLL  300
LVSKVLDELQ LDLHHVAGGL IGDFYSYLFN TKIYEGSSVY ATAIANKLIE VVDKQYAAIP  360
VTSSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31210.1	4e-66	bHLH family protein