PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc017212.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 591aa MW: 69411.8 Da PI: 9.5583

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc017212.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	29.6	2.2e-09	46	124	7	90
FAR1 7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 A+ +GF ++k+++k++ ng++ + +++C+k g e + + +r++++++ +C +l+ k + + +w + HnHel Cse_sc017212.1_g010.1 46 ASGLGFVIVKKRTKSE--NGQMFEINYKCTKGGIYEYHGSG----KRKTKTKKSNCPFRLVAKYRPtQYNWILRVKCDSHNHELL 124 77899999987666..999***********98877....899999**********9788888888889***96 PP

Sequence ? help Back to Top
Protein Sequence Length: 591 aa Download sequence
MRERVRQMCM GWAFRYREEV SEDCPFIRQE AFRSHEEVTE WVQNIASGLG FVIVKKRTKS 60 ENGQMFEINY KCTKGGIYEY HGSGKRKTKT KKSNCPFRLV AKYRPTQYNW ILRVKCDSHN 120 HELLESLYGV PYAMRLKDDE LSLVKELSEY SVPPRNILST IKGRNPDNVS SVRTIYNALD 180 KFRRARVGDR TQIQVLYSHL VDSGYAYYPR VNEHNELEEL FFVHPTSNAL WRTFPEIMLM 240 DSTYNTTMFK LPLLEIVGVT PTNKTFSMAY SFIHGEKGHN FQWVLQRIKE VIDKRYYPRV 300 IVTDRDLALV GACRAEFPTA HKLLCRWHIE QNLMKFMRNR CGGIDEYESI KRRWDRLVKA 360 PTRRLFEEQY ERLQQRLVNH APIAEYLDNW LRDYRQMFVS YITDEYRSFG QTTTCRVEAH 420 HALLKLYLGG TQSNLDRLLS AIDKIDTPFH CKKPPPEDGS SSNDDDDDDH HHHHHHTSFR 480 DDIRQFRNVF TKASSFVKNN MLTKLRSIYQ PASDDTREPV IQKNTRGRPS AKDKMGKATQ 540 VPDLNEVPDL NEVPTVNHRR STATRSRQVL NFNKEPARHS SFTGPSDHPK I

Sequence ? help Back to Top

Protein Sequence Length: 591 aa Download sequence

MRERVRQMCM GWAFRYREEV SEDCPFIRQE AFRSHEEVTE WVQNIASGLG FVIVKKRTKS  60
ENGQMFEINY KCTKGGIYEY HGSGKRKTKT KKSNCPFRLV AKYRPTQYNW ILRVKCDSHN  120
HELLESLYGV PYAMRLKDDE LSLVKELSEY SVPPRNILST IKGRNPDNVS SVRTIYNALD  180
KFRRARVGDR TQIQVLYSHL VDSGYAYYPR VNEHNELEEL FFVHPTSNAL WRTFPEIMLM  240
DSTYNTTMFK LPLLEIVGVT PTNKTFSMAY SFIHGEKGHN FQWVLQRIKE VIDKRYYPRV  300
IVTDRDLALV GACRAEFPTA HKLLCRWHIE QNLMKFMRNR CGGIDEYESI KRRWDRLVKA  360
PTRRLFEEQY ERLQQRLVNH APIAEYLDNW LRDYRQMFVS YITDEYRSFG QTTTCRVEAH  420
HALLKLYLGG TQSNLDRLLS AIDKIDTPFH CKKPPPEDGS SSNDDDDDDH HHHHHHTSFR  480
DDIRQFRNVF TKASSFVKNN MLTKLRSIYQ PASDDTREPV IQKNTRGRPS AKDKMGKATQ  540
VPDLNEVPDL NEVPTVNHRR STATRSRQVL NFNKEPARHS SFTGPSDHPK I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-15	FAR1 family protein