PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc017106.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 337aa    MW: 38382.6 Da    PI: 10.3199
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc017106.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR133.21.7e-10130212790
                   FAR1   7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek..dgkwevtkleleHnHela 90 
                            A+++GF ++k+++k+    g  ++ +f+Cs++g++++e  + ++ +r++++ +t+C  kl  k  k  ++ w +    l HnH+++
  Cse_sc017106.1_g010.1 130 AQSIGFLIVKARTKTD--RGYKYSIEFKCSRHGTSTREGLE-DELQRQTSTAKTNCPFKLLAKYIKgeTNGWILRVKCLRHNHHFV 212
                            899********98887..6667***************9999.888999999************999878889999999*****986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MYSARGIVED NVLLAVLAYN ATKKQQHKSQ IPPTSNKQQH QLARKQQHKS QIPPTSNKQQ  60
HQIARKQQHK SHIPPTSKKA TSLSPPQEGI QHKVSQSTTT NNNTMSSSPF DTQEVFPDGD  120
VLTNWVQSIA QSIGFLIVKA RTKTDRGYKY SIEFKCSRHG TSTREGLEDE LQRQTSTAKT  180
NCPFKLLAKY IKGETNGWIL RVKCLRHNHH FVDSLHGFPH AMRLKDHELV LVVQLTKHKV  240
APRIILSSLK ESDPDNVSNI KTTYNAQNKI SGAIRGDRTP IQVLLAHLRR QGYTYYPRVN  300
DRTNELEEIF FSPDVICPMD NIPRNHADGL HIQHYVV