PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc017073.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ZF-HD
Protein Properties Length: 271aa    MW: 30404.2 Da    PI: 9.0808
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc017073.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer61.42e-1962118457
            ZF-HD_dimer   4 vrYkeClkNhAasl.GghavDGCgEfmpsegee..gtaaalkCaACgCHRnFHRrev 57 
                            ++Y  C kNh  s+  g ++DGCgEfmp ++++  ++++ + C AC CHR+FHR ++
  Cse_sc017073.1_g010.1  62 ITYGRCYKNHGSSTsNGIVLDGCGEFMPLHNATdpNDPSFFICDACSCHRSFHREHM 118
                            68********98872699**********8766656789999*************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MASPTRSTPP TIVVSNTIRS SGYEVEPPIR AQPTQMGMGP VTFPFLTSGE LRGSHHLTPP  60
FITYGRCYKN HGSSTSNGIV LDGCGEFMPL HNATDPNDPS FFICDACSCH RSFHREHMIM  120
SPMQPMHNFV DYPCPLGRSR DTPSSIPVSL SDYPPPPTPH MHWAFNQDGL PPQQHINNNN  180
HHHHNHNHVG SGSNQNKDKR HRSKFSVEQT EKMLDLAGRI GWKIQKNNDE MVMLFCNSIG  240
VSKSTFKIWI RNNKNKHVKR NSGVNGSPSS Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15210.12e-31ZF-HD family protein