PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc017052.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 539aa MW: 61412 Da PI: 8.6375

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc017052.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	21.3	8.5e-07	26	112	7	89
FAR1 7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.......dgkwevtkleleHnH 87 A++ GF ++k+++k+ g ++ +f+Cs++g++++e + ++ +r++++ +++C +l k k ++ w + l HnH Cse_sc017052.1_g010.1 26 AQSNGFLIVKERTKTD--RGYKYSIEFKCSRHGTSAREGLE-DELERQTSTAKINCPFRLLAKFIKgrtgttkTSGWILRVKCLRHNH 110 8899***9998887..6667************999.8888899999***9998775543323333455777777799999 PP FAR1 88 el 89 ++ Cse_sc017052.1_g010.1 111 DC 112 86 PP

Sequence ? help Back to Top
Protein Sequence Length: 539 aa Download sequence
MSSSPFDTQE VFGTEVALTD WVQSTAQSNG FLIVKERTKT DRGYKYSIEF KCSRHGTSAR 60 EGLEDELERQ TSTAKINCPF RLLAKFIKGR TGTTKTSGWI LRVKCLRHNH DCVDSFHGFS 120 QAMRLKESQL VLVDQLTKHQ VAPRIIRSSI KESDPNNVSS IKTVYNAQNK IRGTSRGDLT 180 PIQLLLLRPK MCSRTIIITY RIYWSKNRTT TCRVEGQHAL LKLYLGSTQS SLDTLLCSVD 240 KIIAAQETAI RDSLNTSKIK KLHSAKDKKS KAKQNIPDLN KEPPTGHRRS YTKPKKVRDL 300 NEETARHSSY VGEPSNFPDL NEEVSEGDLR HDLYIPNDSS EYFMARIPPL FRRWILGIVN 360 VEGDGNCGYQ ALAVGLGHHE QIWPRLRIIV REEVDNNREV YMQIWGTIWF TTLVNSLNWF 420 ESGPVPYAYW MIMPDTGVAI ATALLTVPLD GPDTSQLLSP VVILRVGEDQ AAHYVHAISA 480 PALVLPHLLL QESDDIQWRD IHCTSRVDEY EREIAGLRRR ISELEFRPGT EDYGCRYFM

Sequence ? help Back to Top

Protein Sequence Length: 539 aa Download sequence

MSSSPFDTQE VFGTEVALTD WVQSTAQSNG FLIVKERTKT DRGYKYSIEF KCSRHGTSAR  60
EGLEDELERQ TSTAKINCPF RLLAKFIKGR TGTTKTSGWI LRVKCLRHNH DCVDSFHGFS  120
QAMRLKESQL VLVDQLTKHQ VAPRIIRSSI KESDPNNVSS IKTVYNAQNK IRGTSRGDLT  180
PIQLLLLRPK MCSRTIIITY RIYWSKNRTT TCRVEGQHAL LKLYLGSTQS SLDTLLCSVD  240
KIIAAQETAI RDSLNTSKIK KLHSAKDKKS KAKQNIPDLN KEPPTGHRRS YTKPKKVRDL  300
NEETARHSSY VGEPSNFPDL NEEVSEGDLR HDLYIPNDSS EYFMARIPPL FRRWILGIVN  360
VEGDGNCGYQ ALAVGLGHHE QIWPRLRIIV REEVDNNREV YMQIWGTIWF TTLVNSLNWF  420
ESGPVPYAYW MIMPDTGVAI ATALLTVPLD GPDTSQLLSP VVILRVGEDQ AAHYVHAISA  480
PALVLPHLLL QESDDIQWRD IHCTSRVDEY EREIAGLRRR ISELEFRPGT EDYGCRYFM