PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc017012.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 321aa    MW: 35728.1 Da    PI: 8.5632
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc017012.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.98.8e-1482134154
                            CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
                    HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                            ++ +hn+ Er RR+r+N+ ++ Lr+llP  a   ++kK+s   ++ +A eYI +L
  Cse_sc017012.1_g020.1  82 KKLNHNASERDRRKRVNDLYAYLRSLLPIsA--DQKKKVSIPGTVSRALEYIPEL 134
                            6789*************************65..78888**************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MMLALSPTLF STNYEWPLGD NIDKNHQQDC NSISMDVEAN SYDSVLDFPT YDQIRQDFTP  60
DSSNSFGGAI NGNIGDPKKV SKKLNHNASE RDRRKRVNDL YAYLRSLLPI SADQKKKVSI  120
PGTVSRALEY IPELRKEVET LIRKKEKLSS YSTSSTSTSQ KNIGIEGQSS KDVTTNTNSS  180
DNPLFIKPHQ ATSKKEKLSS YSTSSTSTSQ KNIGIEGQSS KDVTTNTNSS VVSSVSILGE  240
KEVVIQLISS MDRMNKNKKI GSLSRVLTYL ESEENGFVLL NSTTFKCSGE HMLLNTLHLQ  300
VQGDKKVDVE MLKEKLCHFC Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.16e-25bHLH family protein