PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc017011.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Trihelix

Protein Properties

Length: 336aa MW: 38337.9 Da PI: 5.8859

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc017011.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	60.9	3.2e-19	25	116	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfd 83 +W+++e l+Li+a+r+++++lrrg+l+ ++W++v++ + +++ qC++k+e+l++ry+ +k++e + + +s++ yf+ Cse_sc017011.1_g030.1 25 CWSQEEALVLIQAYRDRWHALRRGCLRTADWDAVAEELgricPGVTPMKTSAQCRHKMEKLRQRYRVEKQREMSFgGGQFVSNWFYFE 112 7***********************************66443334478999***************9997568999*** PP trihelix 84 qlea 87 +ea Cse_sc017011.1_g030.1 113 AMEA 116 85 PP

Sequence ? help Back to Top
Protein Sequence Length: 336 aa Download sequence
MSGNGIIISG NGGDTKPPRK FPPLCWSQEE ALVLIQAYRD RWHALRRGCL RTADWDAVAE 60 ELGRICPGVT PMKTSAQCRH KMEKLRQRYR VEKQREMSFG GGQFVSNWFY FEAMEALERN 120 DEIEVVGSGS AYSGLNPGRG IRFKPNSVNV RVPNNYVTQV ETNDNDEDNE NEDEYEDGYY 180 ETPINKNLGK TQSYAPRYRE LEHLGARPRK VIKTGSNVNS GYGYWNGNEE ERGSGYVERN 240 GRSLVGYSES EKRGVKRSNE DEDDDGHRDG DPLGKLVSSI KVLADGFVKM EKMKMDMVRE 300 IETMRMEAEM KRNEMLLESQ RQMVAAFVKG LAEDKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44730.1	2e-35	Trihelix family protein