PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc016982.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 398aa    MW: 44942.1 Da    PI: 8.0887
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc016982.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR124.96.8e-0819106790
                   FAR1   7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.......dgkwevtkleleHnH 87 
                            A++ GF ++k ++k+    g  ++ +f+Cs++g++++e  + ++ +r++ + +t+C  +l  k  k       ++ w +    l HnH
  Cse_sc016982.1_g020.1  19 AQSNGFLIVKGRTKTD--RGYKYSIEFKCSRHGTSAREGLE-DELQRQTGTAKTNCPFRLLAKYIKgrtgtakTNGWILRVKCLRHNH 103
                            8899*******98888..6667****************999.888999999********988876544344434567777777***** PP

                   FAR1  88 ela 90 
                            +l+
  Cse_sc016982.1_g020.1 104 DLV 106
                            996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    
MLQMFRDEVV LTNWVQSTAQ SNGFLIVKGR TKTDRGYKYS IEFKCSRHGT SAREGLEDEL  60
QRQTGTAKTN CPFRLLAKYI KGRTGTAKTN GWILRVKCLR HNHDLVDSFH GFSQAMRLKE  120
SELVLVEQLT KHQVAPRIIL SSLKESDPNN VSNIKTIYNA QNKIRGAIRG DMNPIQLFLV  180
HLRSKGYTYY PRVNDHTNEL EEIFFVHPTK PKKVRDLNEE TARHSSYLGE PSNVPDLNEE  240
PSKGDLRHEL YIPDDSSEYF IARIPPLFRR WILGIVNVEG DGNCGYRALS VGYAPHDYWM  300
IMPDTGVAIA TALNRPIVCI SNSASTTCLP LRSGPETAQL LSPVVILRVG EDQAAHFVHA  360
ISDPAPVLPH LLLQESDDVQ WRDIQCVSNT PARVESPN