PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc016942.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GRAS
Protein Properties Length: 535aa    MW: 60714.1 Da    PI: 5.3427
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc016942.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS2913.1e-891625313374
                   GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetsekn..sseelaalklfsev 87 
                             +Ll++Ae v  ++ e  +++L+r     s +g+p++R++ y+ eAL++++++ s+  +  +l+    +++n     + + + +f++ 
  Cse_sc016942.1_g010.1 162 FQLLTAAEKVGRKQYETGSKFLTRCGWVTSDSGTPVERVVYYLCEALKRKISKeSGIPVPMKLEKLGLKNENpnGMGTNQTFLAFHQS 249
                            589*************************************************94444444444333333333333333444455**** PP

                   GRAS  88 sPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvp 175
                             P+ ++ h+   qaI++ + ++++vH iD+ i  G+QW a++qaLa+R++    +++T+++ ++  + +++ etg+rL++fA +l++p
  Cse_sc016942.1_g010.1 250 LPFNQVLHFSGIQAIVDQFGTSSKVHLIDIHIRSGIQWTAMMQALADRKSHIELFKLTAFATSS--DVQKVGETGKRLESFAVSLNIP 335
                            **************************************************************55..99******************** PP

                   GRAS 176 fefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealey 263
                            f f++lv ++++++e ++L+v+ +E++aV +++ l ++++++++l++    +++++k+++P ++v++e ea+hns+sF+ rf+e+l y
  Cse_sc016942.1_g010.1 336 FLFKILVLSDISEVEQQQLEVHDDEVVAVYCHVILRTMVSNPLKLDN----LMRAIKTINPSIIVMSEVEANHNSTSFVSRFTETLFY 419
                            ***************************************99988888....************************************* PP

                   GRAS 264 ysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyr 350
                            y alfd+l+a ++r++ +r+++E   ++   +n+v++eg+er+ r   +++Wr+ ++++G+ +++ls++ + qa+l+l++++     +
  Cse_sc016942.1_g010.1 420 YGALFDCLDAYMSRDDVHRAMLEGIHFADGMQNIVSAEGEERVSRSVDMNTWRSFFTRFGMVEIELSDSCMYQANLVLQQFScASSCM 507
                            **********************************************************************************9999** PP

                   GRAS 351 veeesgslvlgWkdrpLvsvSaWr 374
                            +e++ +sl+lgWk+ pL s+S W+
  Cse_sc016942.1_g010.1 508 LENNGKSLILGWKGTPLHSLSTWK 531
                            ***********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 535 aa     Download sequence    
MNPNSIFDLS HFNPFETYGD IVDMAPDQQL PALEDPNQTI NNDFHVNDHE VHDQTIPEFN  60
KSINANSKLK LTYQELPCPT YLRLLNNYQS KFKRLREDSD NENVADVLKN LSTVEIIELA  120
AEKFIMFSTQ KVNGYTMFTH PYGSLAFTSL SVDETREVEL VFQLLTAAEK VGRKQYETGS  180
KFLTRCGWVT SDSGTPVERV VYYLCEALKR KISKESGIPV PMKLEKLGLK NENPNGMGTN  240
QTFLAFHQSL PFNQVLHFSG IQAIVDQFGT SSKVHLIDIH IRSGIQWTAM MQALADRKSH  300
IELFKLTAFA TSSDVQKVGE TGKRLESFAV SLNIPFLFKI LVLSDISEVE QQQLEVHDDE  360
VVAVYCHVIL RTMVSNPLKL DNLMRAIKTI NPSIIVMSEV EANHNSTSFV SRFTETLFYY  420
GALFDCLDAY MSRDDVHRAM LEGIHFADGM QNIVSAEGEE RVSRSVDMNT WRSFFTRFGM  480
VEIELSDSCM YQANLVLQQF SCASSCMLEN NGKSLILGWK GTPLHSLSTW KFLQE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.12e-58GRAS family protein