PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc016911.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | FAR1 | ||||||||
Protein Properties | Length: 261aa MW: 30490.3 Da PI: 10.0402 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 48.8 | 2.4e-15 | 2 | 93 | 5 | 90 |
FAR1 5 eYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnH 87 +YA++ GF vrks +k+ r+g ++++ +vC++eg ++ + + ++k++r+++ + t+Cka+++ ++ + k+++t +++ HnH Cse_sc016911.1_g010.1 2 KYASKGGFVVRKSCQKRL-RSGIVKQKYLVCNREGCPKGIHVDtldlenSDKQKRSSNLHITSCKARVMFELIPgSTKYKLTVFNSIHNH 90 7***********998887.8898*************99988888999888899999999***************9*************** PP FAR1 88 ela 90 el Cse_sc016911.1_g010.1 91 ELE 93 *96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MKYASKGGFV VRKSCQKRLR SGIVKQKYLV CNREGCPKGI HVDTLDLENS DKQKRSSNLH 60 ITSCKARVMF ELIPGSTKYK LTVFNSIHNH ELERKEYKHL SKTERQLTYA EQLFIVKAAS 120 VNIGATRAHH LLIGLKGSYL LVHGTTVDFK NFFRSICSKI YDHTDFKRKF NQIVWNMYIG 180 PVEFEYQWGK LLDEFNLHNH KWLTKMFRIR SCWIPAFFVD YPLCGLMRTT SRSESENSFF 240 SQFTNSGSTL MNFMNCFETA M |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G15090.1 | 7e-13 | FAR1 family protein |