PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc016822.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | C3H | ||||||||
Protein Properties | Length: 149aa MW: 16180.4 Da PI: 6.6197 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 17.3 | 8.4e-06 | 48 | 61 | 13 | 26 |
S--TTTTT-SS-SS CS zf-CCCH 13 GtCkyGdrCkFaHg 26 G+Ck+G++CkF+Hg Cse_sc016822.1_g020.1 48 GHCKHGSSCKFSHG 61 9************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 149 aa Download sequence |
MPQRYSVVGR SGGEGSGVAE WEEVTPNVGR SGGEGSGVAE WEEVTPNGHC KHGSSCKFSH 60 GSDYGFKHMA LGVAGLGCED ALVHLLNYLW PNIFETSPNV LNAVMEAIEG MRVALGAAVV 120 LNYCLQGLFH PARKVREVYW KTFLSIFKH |