PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc016732.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | SBP | ||||||||
Protein Properties | Length: 323aa MW: 36458.1 Da PI: 9.5768 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 130.2 | 7.7e-41 | 128 | 203 | 1 | 76 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +Cqv+gC++ ls++key+rrhkvCe+hskap+v+v gl+qrfCqqCsrfh +sefD++krsCrrrL++hn+rrrk Cse_sc016732.1_g020.1 128 RCQVDGCHVALSNVKEYYRRHKVCEIHSKAPKVVVLGLQQRFCQQCSRFHVMSEFDDAKRSCRRRLEGHNQRRRKG 203 6*************************************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 323 aa Download sequence |
MESSGWRKCL ASIDNGGNDM RVHNNSNLAN DAWDNTNIIS TNTSTSTTPI FAASGTPYYD 60 YTNQILFNNN NNNNHCIRDP HMMCLRLGKR HYCSDTVVVP GRYMAAESSS AANKRPGKQP 120 FPYAMAARCQ VDGCHVALSN VKEYYRRHKV CEIHSKAPKV VVLGLQQRFC QQCSRFHVMS 180 EFDDAKRSCR RRLEGHNQRR RKGTISNSNT LPRNFPHSHE NHPMMERQLR PLSRLPSPPH 240 SKPGYALSLL SSPNLEPWMN SSGDLSSRCS AALYELIAAN RATNLAGNLL NQNTSHQTVI 300 ETTVQTLPNT QMWIDSMMHV TRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27370.3 | 3e-35 | SBP family protein |