PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc016632.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | C2H2 | ||||||||
Protein Properties | Length: 183aa MW: 20634.2 Da PI: 6.7425 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.9 | 7.4e-05 | 49 | 71 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C + F++ L H+++H Cse_sc016632.1_g020.1 49 YSCNFCRREFRSAQALGGHMNVH 71 99*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence |
MEQYSQYLMW VKNKSSIFNN SFSHSWEEQA FAEDARGPLG GFVWPPRSYS CNFCRREFRS 60 AQALGGHMNV HRRERAKLKQ SSNSTQQNPK SILESTTPSC FRSPDLASRI SSILVQESAT 120 LVSNSDAKSC VCEEVVVLGP VGTNLYLGFD ECEDEVMNCK RQKTGVSPLV IEDQVDLELR 180 LAR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 72 | 80 | RRERAKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06070.1 | 4e-30 | C2H2 family protein |