PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc016603.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 315aa    MW: 36101.9 Da    PI: 10.0943
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc016603.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.67e-145598347
                           SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                           +W++eEde l+++++++G++ W++I   ++ gR++ +c srw+++
  Cse_sc016603.1_g050.1 55 PWSPEEDEMLLNLFEKHGPNYWSLIITSIP-GRSDQSCWSRWLSL 98
                           8*****************************.***********976 PP
2Myb_DNA-binding39.21.7e-12103141545
                            -HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
        Myb_DNA-binding   5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                             +eEde l ++v+++G++ W+ I + ++ gR++k c+ rw+
  Cse_sc016603.1_g050.1 103 MPEEDEMLQNLVEKHGPN-WSVIGKFIP-GRSAKTCRVRWF 141
                            59**************77.*********.***********7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MESDESGVTK LKNKMSFSKY RLRRKKGATH RVHLRLTILS VKNRQKKDMD PIERPWSPEE  60
DEMLLNLFEK HGPNYWSLII TSIPGRSDQS CWSRWLSLQR SFMPEEDEML QNLVEKHGPN  120
WSVIGKFIPG RSAKTCRVRW FSSPQVMPFT PEEDHTILHA HACYGNKWVS NAKKLIGRPY  180
DVIQNHWNST LKWKSSSMTN EAKIPHPSFS DINCGQGNSC IHDWNLNLAV APSISDMARD  240
NMSTGGTHSN SSDHSAPSLN ALSKRDLSQT MSDSDNSPDV SPKKQCFEPV RPSRLSRLSR  300
FSSKKHTKMS RFFEA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23290.18e-31MYB family protein