PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc016575.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | NAC | ||||||||
Protein Properties | Length: 261aa MW: 29444.3 Da PI: 9.5462 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 165.6 | 1.7e-51 | 14 | 142 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 lppGfrFhPtdeelvv+yL++kv++++l++ ++i+evd++k++PwdLp e+e +fFs+r+ ky++g+r+nrat sgyWkatg Cse_sc016575.1_g030.1 14 LPPGFRFHPTDEELVVQYLRRKVHSSPLPA-SIIPEVDVCKSDPWDLPGD---MENERFFFSTREVKYPNGNRSNRATLSGYWKATGL 97 79****************************.89***************54...46799****************************** PP NAM 89 dkevlsk.....kgelvglkktLvfykgrapkgektdWvmheyrl 128 dk+++s+ ++ +vg+kktLvfykg+ p+g++tdW+mheyrl Cse_sc016575.1_g030.1 98 DKQIVSSsssknQQVVVGMKKTLVFYKGKPPSGTRTDWIMHEYRL 142 *****99777655555***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MDKVNFVKNG VLRLPPGFRF HPTDEELVVQ YLRRKVHSSP LPASIIPEVD VCKSDPWDLP 60 GDMENERFFF STREVKYPNG NRSNRATLSG YWKATGLDKQ IVSSSSSKNQ QVVVGMKKTL 120 VFYKGKPPSG TRTDWIMHEY RLASQGVENW VLCRIFLKKR GNKKEEEKEY KETIIEVGNV 180 VNNTNVEMKP KMKPVFYDFL AKSSLRKEKT GDLNLAPAYS SSGSGSSGVT DAACGGYGSG 240 EHEHEDETSD HVSSFRKKQL P |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 1e-89 | NAC family protein |