PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc016463.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 351aa    MW: 39240.4 Da    PI: 6.5123
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc016463.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR122.14.9e-071381824790
                   FAR1  47 ktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                            +++k++r+++ + t Cka+++ ++   + k+++t +++ HnHel 
  Cse_sc016463.1_g030.1 138 NSDKQKRSSNLHITCCKARVMFELIPgSTKYKLTVFDSIHNHELE 182
                            3568899999999*************9****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MDSIPNSSVS SDRSSSSQEI GATELSSSSE NVVVSDLPST TEDIVVSDDI SAKYTEEIVA  60
YEHGDESTAI KKLNALKTPE SFSTHSNFDT PGGTVYYIPK VPVDVLLAKG NVYNSVDECI  120
SAEGCPKGIH VDTLDLENSD KQKRSSNLHI TCCKARVMFE LIPGSTKYKL TVFDSIHNHE  180
LERKEYKHLS KTERQLTYAE QLFIVKAASV NIGATRAHHL LTGLKGSYLL VHAKMENRKK  240
HVPNFSFDYL VENAELSAIF WADEVSKYNY KEFCDVVSFD ATYRTNKYKM MFVPFTAIAN  300
HRKYVTVVAG LLKNETAKSY IWLLKAFGKA PSIVVTDQDG AMRKVIEQEF V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22170.26e-21FAR1 family protein