PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc016325.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 335aa MW: 37971.9 Da PI: 5.0217

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc016325.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	28.2	6.4e-09	176	222	46	91
FAR1 46 kktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 + ++k+ r+r+ + tgC a++k+ ++ +gk++++k++ HnH+l+p Cse_sc016325.1_g020.1 176 QGNDKAIRNRNLQVTGCMARVKLDLDPvSGKYRLAKFNPRHNHTLCP 222 22578999*************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence
MDNIGEIIHV QVVEGSAGSF CDAEQNESIE LGSVSSVRMV IDSVEKNQNV EGGSEVMSVD 60 DVERVRIVEE GSEVISVDDV EGVRIVEEGI LAINEVGDAE RVRFIVEDDI RSGETDDENE 120 THPFLATIAF ERVCLDFTSF SKISITKLNK VAKIIREEKF TEGKLRNINI DTLKSQGNDK 180 AIRNRNLQVT GCMARVKLDL DPVSGKYRLA KFNPRHNHTL CPEVYRHLSK TERKMVYSEK 240 LFVMKAKPAN IGATVAHHIY SSMKGYDLVH GQVMDFKNYF RELNCFIGEG DSQMLINKME 300 NRKAYVPNFS FHYKVEDSEL VALFWADETP QENHK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-08	FAR1 family protein